RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TMEM143Q96AN5 459 aa10.21□□□□□ -0.78
CUX1-206ENST00000437600 KREMEN1Q96MU8 473 aa10.21□□□□□ -0.78
CUX1-206ENST00000437600 AGPAT1Q99943 283 aa10.21□□□□□ -0.78
CUX1-206ENST00000437600 STRA6Q9BX79 667 aa10.21□□□□□ -0.78
CUX1-206ENST00000437600 CXCL11O14625 94 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SLC26A4O43511 780 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 FDX1P10109 184 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 PRKCEQ02156 737 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 LY6KQ17RY6 165 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SPRYD7Q5W111 196 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 STXBP4Q6ZWJ1 553 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 ZNF572Q7Z3I7 529 aaPredicted RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 TRIM50Q86XT4 487 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 UBLCP1Q8WVY7 318 aaPredicted RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 POMGNT1Q8WZA1 660 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 ACCSQ96QU6 501 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 FAM118BQ9BPY3 351 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 FAM213AQ9BRX8 229 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 PORCNQ9H237 461 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 PTPN22Q9Y2R2 807 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 LCTP09848 1927 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 PFASO15067 1338 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SOWAHBA6NEL2 793 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SMIM23A6NLE4 172 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 PGRMC1O00264 195 aaKnown RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 IRAK1P51617 712 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 GTF2A1P52655 376 aaPredicted RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 OAZ1P54368 228 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 STXBP2Q15833 593 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 FAM182AQ5T1J6 154 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 ZDHHC14Q8IZN3 488 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 ZBTB10Q96DT7 871 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 BICD1Q96G01 975 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.781e-6■■■□□ 15.3
CUX1-206ENST00000437600 KMT5AQ9NQR1 393 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 CWC15Q9P013 229 aaKnown RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 RBPJLQ9UBG7 517 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SEL1LQ9UBV2 794 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 PLAAQ9Y263 795 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 HNRNPDLO14979 420 aaKnown RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 KRT5P13647 590 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 CCT5P48643 541 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 MXI1P50539 228 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 ALDH5A1P51649 535 aaPredicted RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 JAK3P52333 1124 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SEC24CP53992 1094 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 GNGT1P63211 74 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 SLC39A4Q6P5W5 647 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 C4orf19Q8IY42 314 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 IQCKQ8N0W5 287 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 TMEM130Q8N3G9 435 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 NEK9Q8TD19 979 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 GPRASP2Q96D09 838 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 MAP3K20Q9NYL2 800 aaKnown RBP10.2□□□□□ -0.78
CUX1-206ENST00000437600 TBX20Q9UMR3 447 aa10.2□□□□□ -0.78
CUX1-206ENST00000437600 DCDC2CA8MYV0 355 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 CNMDO75829 334 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 CFHP08603 1231 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 ECHS1P30084 290 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 TNNC1P63316 161 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 ITIH3Q06033 890 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 GNPTABQ3T906 1256 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 GJC2Q5T442 439 aaPredicted RBP10.19□□□□□ -0.78
CUX1-206ENST00000437600 CYP4F22Q6NT55 531 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 EMBQ6PCB8 327 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 INTS8Q75QN2 995 aaKnown RBP10.19□□□□□ -0.78
CUX1-206ENST00000437600 TMEM161BQ8NDZ6 487 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 C18orf8Q96DM3 657 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 RNPC3Q96LT9 517 aaKnown RBP10.19□□□□□ -0.78
CUX1-206ENST00000437600 PRDM16Q9HAZ2 1276 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 TMEM59LQ9UK28 342 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 STXBP5LQ9Y2K9 1186 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 SNX24Q9Y343 169 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 GTPBP10A4D1E9 387 aaKnown RBP10.19□□□□□ -0.78
CUX1-206ENST00000437600 IGF2BP3O00425 579 aaKnown RBP eCLIP10.19□□□□□ -0.78
CUX1-206ENST00000437600 CHRNB2P17787 502 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 PAK2Q13177 524 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 ZBTB41Q5SVQ8 909 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 BCAS4Q8TDM0 211 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 CPA5Q8WXQ8 436 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 COPS5Q92905 334 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 HES6Q96HZ4 224 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 MKNK1Q9BUB5 465 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 CAPS2Q9BXY5 557 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 FBXL5Q9UKA1 691 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 ATP8A1Q9Y2Q0 1164 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 RRP15Q9Y3B9 282 aaKnown RBP10.19□□□□□ -0.78
CUX1-206ENST00000437600 SH3BP1Q9Y3L3 701 aa10.19□□□□□ -0.78
CUX1-206ENST00000437600 ATP2A1O14983 1001 aa10.18□□□□□ -0.78
CUX1-206ENST00000437600 DDX3YO15523 660 aaKnown RBP10.18□□□□□ -0.78
CUX1-206ENST00000437600 ARIH2O95376 493 aa10.18□□□□□ -0.78
CUX1-206ENST00000437600 GJB6O95452 261 aa10.18□□□□□ -0.78
CUX1-206ENST00000437600 ATP4AP20648 1035 aa10.18□□□□□ -0.78
CUX1-206ENST00000437600 COMTP21964 271 aa10.18□□□□□ -0.78
CUX1-206ENST00000437600 UBA1P22314 1058 aaKnown RBP10.18□□□□□ -0.78
CUX1-206ENST00000437600 HOXA7P31268 230 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms