RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SMARCAD1Q9H4L7 1026 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 GCNT1Q02742 428 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 PRPF4BQ13523 1007 aaKnown RBP27.73■■■□□ 2.03
CPNE1-216ENST00000437340 PLCB4Q15147 1175 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 RPS6KA1Q15418 735 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 ZNF792Q3KQV3 632 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 BEND6Q5SZJ8 279 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-216ENST00000437340 PRPF31Q8WWY3 499 aaKnown RBP27.73■■■□□ 2.03
CPNE1-216ENST00000437340 TAF4BQ92750 862 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 PSMB7Q99436 277 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 MORF4L1Q9UBU8 362 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 NLRP11P59045 1033 aaKnown RBP27.72■■■□□ 2.03
CPNE1-216ENST00000437340 CDCA2Q69YH5 1023 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-216ENST00000437340 ARMCX2Q7L311 632 aa27.72■■■□□ 2.03
CPNE1-216ENST00000437340 TARS2Q9BW92 718 aaKnown RBP27.72■■■□□ 2.03
CPNE1-216ENST00000437340 PLXNA1Q9UIW2 1896 aa27.72■■■□□ 2.03
CPNE1-216ENST00000437340 ZBTB42B2RXF5 422 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 KIF4AO95239 1232 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 C2orf54Q08AI8 447 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 CRELD2Q6UXH1 353 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-216ENST00000437340 DNAAF5Q86Y56 855 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 EPS8L1Q8TE68 723 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 MSTO1Q9BUK6 570 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 ISCUQ9H1K1 167 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 ADGRA2Q96PE1 1338 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 STRNO43815 780 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 MARK3P27448 753 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 CBX1P83916 185 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 TCEAL1Q15170 157 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 ZACNQ401N2 412 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 TRIM50Q86XT4 487 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 SLC20A1Q8WUM9 679 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 PBKQ96KB5 322 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 HAPLN2Q9GZV7 340 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 VTA1Q9NP79 307 aa27.71■■■□□ 2.03
CPNE1-216ENST00000437340 SEPT11Q9NVA2 429 aaKnown RBP27.71■■■□□ 2.03
CPNE1-216ENST00000437340 SUCLA2Q9P2R7 463 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-216ENST00000437340 NOCTQ9UK39 431 aaKnown RBP27.71■■■□□ 2.03
CPNE1-216ENST00000437340 HBP1O60381 514 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 GZMAP12544 262 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 USP8P40818 1118 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 DRP2Q13474 957 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 ZNF467Q7Z7K2 595 aaPredicted RBP27.7■■■□□ 2.02
CPNE1-216ENST00000437340 RPUSD2Q8IZ73 545 aaKnown RBP27.7■■■□□ 2.02
CPNE1-216ENST00000437340 ZNF516Q92618 1163 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 FUT8Q9BYC5 575 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 CCDC113Q9H0I3 377 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 C2orf40Q9H1Z8 148 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 ABCB6Q9NP58 842 aa27.7■■■□□ 2.02
CPNE1-216ENST00000437340 RBAKQ9NYW8 714 aaPredicted RBP27.7■■■□□ 2.02
CPNE1-216ENST00000437340 TMCO5BA8MYB1 307 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 C4BPAP04003 597 aaKnown RBP27.69■■■□□ 2.02
CPNE1-216ENST00000437340 HADHBP55084 474 aaKnown RBP27.69■■■□□ 2.02
CPNE1-216ENST00000437340 LAMTOR4Q0VGL1 99 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 ZBTB8OSQ8IWT0 167 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 RHOT2Q8IXI1 618 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 SLC35G2Q8TBE7 412 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 COPS5Q92905 334 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 CCDC102AQ96A19 550 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 ZBTB45Q96K62 511 aaPredicted RBP27.69■■■□□ 2.02
CPNE1-216ENST00000437340 MRPL4Q9BYD3 311 aaKnown RBP27.69■■■□□ 2.02
CPNE1-216ENST00000437340 MCM3APO60318 1980 aa27.69■■■□□ 2.02
CPNE1-216ENST00000437340 SGPL1O95470 568 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 TNNI1P19237 187 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 ADORA2AP29274 412 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 ACOT2P49753 483 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 MKRN4PQ13434 485 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-216ENST00000437340 LAMC2Q13753 1193 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 PEX26Q7Z412 305 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 PALB2Q86YC2 1186 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 PDGFCQ9NRA1 345 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 L1RE1Q9UN81 338 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 PACSIN2Q9UNF0 486 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-216ENST00000437340 STXBP5LQ9Y2K9 1186 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 MSCO60682 206 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 RTN2O75298 545 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 GLE1Q53GS7 698 aaKnown RBP27.68■■■□□ 2.02
CPNE1-216ENST00000437340 NOP9Q86U38 636 aaKnown RBP27.68■■■□□ 2.02
CPNE1-216ENST00000437340 MSL3Q8N5Y2 521 aaKnown RBP27.68■■■□□ 2.02
CPNE1-216ENST00000437340 HHIPL1Q96JK4 782 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 SUGCTQ9HAC7 445 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 C1orf112Q9NSG2 853 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 TAS2R14Q9NYV8 317 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 ANKFY1Q9P2R3 1169 aa27.68■■■□□ 2.02
CPNE1-216ENST00000437340 RBM47A0AV96 593 aaKnown RBP27.67■■■□□ 2.02
CPNE1-216ENST00000437340 TULP1O00294 542 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-216ENST00000437340 MAP2K7O14733 419 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 CLDN3O15551 220 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 CYP26A1O43174 497 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 SASH3O75995 380 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 EDN1P05305 212 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 CHRNB2P17787 502 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 MATR3P43243 847 aaKnown RBP eCLIP27.67■■■□□ 2.02
CPNE1-216ENST00000437340 MAP9Q49MG5 647 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 WDR44Q5JSH3 913 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 IFNL1Q8IU54 200 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 CGRRF1Q99675 332 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 PDE11AQ9HCR9 933 aa27.67■■■□□ 2.02
CPNE1-216ENST00000437340 ZCCHC17Q9NP64 241 aaKnown RBP27.67■■■□□ 2.02
CPNE1-216ENST00000437340 TOM1L1O75674 476 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms