RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 BRIX1Q8TDN6 353 aaKnown RBP5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 CASKIN2Q8WXE0 1202 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 NUDT11Q96G61 164 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 SUCLG2Q96I99 432 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 TMX3Q96JJ7 454 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 LCORQ96JN0 433 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 SLC6A15Q9H2J7 730 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 KCNK12Q9HB15 430 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 GCM1Q9NP62 436 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 PNPOQ9NVS9 261 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 ZDHHC9Q9Y397 364 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 PCDHB1Q9Y5F3 818 aa5.6□□□□□ -1.51
HMGB1P45-201ENST00000435986 ARID1BQ8NFD5 2236 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 MYBBP1AQ9BQG0 1328 aaKnown RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 BTBD11A6QL63 1104 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 ETV2O00321 342 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 FRS3O43559 492 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 GPR32O75388 356 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 VSIG10L2P0DP72 767 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 DDCP20711 480 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 RRADP55042 308 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 BPIFB4P59827 614 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 RAB1AP62820 205 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 JAG1P78504 1218 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 DSC2Q02487 901 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 KIAA2012Q0VF49 1180 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 RTP5Q14D33 572 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 LONRF1Q17RB8 773 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 KHDC1Q4VXA5 237 aaKnown RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 AGBL4Q5VU57 503 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 CYB5RLQ6IPT4 315 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 SRLQ86TD4 932 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 DPP9Q86TI2 863 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 KRT78Q8N1N4 520 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 AOPEPQ8N6M6 819 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 PIK3C3Q8NEB9 887 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 BHLHE22Q8NFJ8 381 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 PGBD4Q96DM1 585 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 SLC35A4Q96G79 324 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 CCDC138Q96M89 665 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 YTHDC1Q96MU7 727 aaKnown RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 BTBD1Q9H0C5 482 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 CHST12Q9NRB3 414 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 ABCF2Q9UG63 623 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 CTDP1Q9Y5B0 961 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 SNX13Q9Y5W8 968 aa5.59□□□□□ -1.51
HMGB1P45-201ENST00000435986 SH3D21A4FU49 640 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 RHPN2P1A8MT19 583 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 ISM1B1AKI9 464 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 IFRD1O00458 451 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 ITGA10O75578 1167 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 TOX4O94842 621 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 KRT1P04264 644 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 MED14OSP0DP75 135 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 SYN1P17600 705 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 NPEPPSP55786 919 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 FZD5Q13467 585 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 GALEQ14376 348 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 SEPT2Q15019 361 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 MCTP2Q6DN12 878 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 TSHZ1Q6ZSZ6 1077 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 MYLK4Q86YV6 388 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 TMEFF1Q8IYR6 380 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 OR5M3Q8NGP4 307 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 OR2I1PQ8NGU4 316 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 EPC1Q9H2F5 836 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 ARMT1Q9H993 441 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 MSL2Q9HCI7 577 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 ARFGAP3Q9NP61 516 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 PIH1D1Q9NWS0 290 aaKnown RBP5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 RTEL1Q9NZ71 1219 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 TRPS1Q9UHF7 1281 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 ADAM29Q9UKF5 820 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 OGDHLQ9ULD0 1010 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 DAAM1Q9Y4D1 1078 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 KCTD3Q9Y597 815 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 PAXBP1Q9Y5B6 917 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 PCDHGB6Q9Y5F9 930 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 PCDHA3Q9Y5H8 950 aa5.58□□□□□ -1.52
HMGB1P45-201ENST00000435986 A6NNZ2 444 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 ADCY6O43306 1168 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 PLA2G1BP04054 148 aaKnown RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 MYL3P08590 195 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 GNAI3P08754 354 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SETSIPP0DME0 302 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 MYF5P13349 255 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 TYRP14679 529 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 ZKSCAN1P17029 563 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 PI3P19957 117 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 MALP21145 153 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SREBF1P36956 1147 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 FXR1P51114 621 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 CTXN1P60606 82 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 GNAI1P63096 354 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 MXRA7P84157 204 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SP140Q13342 867 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 ZNF827Q17R98 1081 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 BORAQ6PGQ7 559 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms