RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TDRD10Q5VZ19 366 aaKnown RBP16.59■□□□□ 0.25
NEDD4-202ENST00000435532 DCLK2Q8N568 766 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 PYROXD1Q8WU10 500 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 ALKBH8Q96BT7 664 aaKnown RBP16.59■□□□□ 0.25
NEDD4-202ENST00000435532 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 HEY1Q9Y5J3 304 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 RPA1P27694 616 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 ACOT2P49753 483 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 FKBP1BP68106 108 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 FBXO16Q8IX29 292 aaPredicted RBP16.59■□□□□ 0.25
NEDD4-202ENST00000435532 C17orf53Q8N3J3 647 aaPredicted RBP16.59■□□□□ 0.25
NEDD4-202ENST00000435532 UHMK1Q8TAS1 419 aaKnown RBP16.59■□□□□ 0.25
NEDD4-202ENST00000435532 SLC7A5P2Q9GIP4 190 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 MSCO60682 206 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 ARL4CP56559 192 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 CYP4A22Q5TCH4 519 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 NPHP3-ACAD11A0A0J9YXS1 232 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 PODXLO00592 558 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 SNX2O60749 519 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 URODP06132 367 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 TPI1P60174 286 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 PCNX4Q63HM2 1172 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 ACRBPQ8NEB7 543 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 NVLO15381 856 aaKnown RBP16.58■□□□□ 0.25
NEDD4-202ENST00000435532 TRIM49P0CI25 452 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 TRIM49CP0CI26 452 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 RAG1P15918 1043 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 CACNB2Q08289 660 aaPredicted RBP16.58■□□□□ 0.25
NEDD4-202ENST00000435532 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.25
NEDD4-202ENST00000435532 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 SOWAHDA6NJG2 315 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 LRRC53A6NM62 1247 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 ENC1O14682 589 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 ATN1P54259 1190 aaPredicted RBP16.58■□□□□ 0.25
NEDD4-202ENST00000435532 DDR1Q08345 913 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.25
NEDD4-202ENST00000435532 NT5C1AQ9BXI3 368 aa16.58■□□□□ 0.25
NEDD4-202ENST00000435532 FBXO2Q9UK22 296 aaPredicted RBP16.58■□□□□ 0.25
NEDD4-202ENST00000435532 CCDC188H7C350 402 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 PSMD3O43242 534 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 TMTC4Q5T4D3 741 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 MROH2AA6NES4 1674 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 AP3B1O00203 1094 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 FMR1NBQ8N0W7 255 aaPredicted RBP16.58■□□□□ 0.24
NEDD4-202ENST00000435532 ASAP3Q8TDY4 903 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 UNC45AQ9H3U1 944 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 PXMP2Q9NR77 195 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 EPHB4P54760 987 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 RHOT1Q8IXI2 618 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 ZNF212Q9UDV6 495 aa16.58■□□□□ 0.24
NEDD4-202ENST00000435532 DFFAO00273 331 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 AMHP03971 560 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 AP1B1Q10567 949 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 ANO4Q32M45 955 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 UBE2Q2Q8WVN8 375 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 PCSK1NQ9UHG2 260 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 BCAR1P56945 870 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 DACT2Q5SW24 774 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 C18orf8Q96DM3 657 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
NEDD4-202ENST00000435532 APOL1O14791 398 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 HARS2P49590 506 aaKnown RBP16.57■□□□□ 0.24
NEDD4-202ENST00000435532 RAB27AP51159 221 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 NOGQ13253 232 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 DSEQ9UL01 958 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 E5RI56 91 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 CABYRO75952 493 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 ROR1Q01973 937 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TMED2Q15363 201 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TRIP13Q15645 432 aaPredicted RBP16.57■□□□□ 0.24
NEDD4-202ENST00000435532 LMBRD2Q68DH5 695 aaPredicted RBP16.57■□□□□ 0.24
NEDD4-202ENST00000435532 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 PI4K2BG5E9Z4 385 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 FKTNO75072 461 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TRPA1O75762 1119 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TGFB3P10600 412 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 CAV1Q03135 178 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 DCUN1D1Q96GG9 259 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 PPP1R2P1Q96PQ5 205 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TRIM9Q9C026 710 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 DRC3Q9H069 523 aa16.57■□□□□ 0.24
NEDD4-202ENST00000435532 TMCC1O94876 653 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 KCNA4P22459 653 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 CASP1P29466 404 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 TRIM54Q9BYV2 358 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 WNT8AQ9H1J5 351 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 EPB41L5Q9HCM4 733 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 XPNPEP3Q9NQH7 507 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 OLA1Q9NTK5 396 aaKnown RBP16.56■□□□□ 0.24
NEDD4-202ENST00000435532 KANSL3Q9P2N6 904 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
NEDD4-202ENST00000435532 CYP2C19P33261 490 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 PBXIP1Q96AQ6 731 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms