RNA–Protein interactions for RNA: ENST00000435425.1

SHH-203, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-203ENST00000435425 CLDN3O15551 220 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 ACTN4O43707 911 aaKnown RBP20.42■□□□□ 0.86
SHH-203ENST00000435425 ALDH2P05091 517 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 SLFN14P0C7P3 912 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 MYBP10242 640 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 SCP2P22307 547 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 PPM1AP35813 382 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 GRM5P41594 1212 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 OR1G1P47890 313 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 YARSP54577 528 aaKnown RBP20.42■□□□□ 0.86
SHH-203ENST00000435425 KRT17Q04695 432 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
SHH-203ENST00000435425 GSTCDQ8NEC7 633 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 FGFBP2Q9BYJ0 223 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 IKZF4Q9H2S9 585 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 GOLPH3LQ9H4A5 285 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 PRDM6Q9NQX0 595 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 PUF60Q9UHX1 559 aaKnown RBP20.42■□□□□ 0.86
SHH-203ENST00000435425 FAN1Q9Y2M0 1017 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 CITO14578 2027 aa20.42■□□□□ 0.86
SHH-203ENST00000435425 FRMD3A2A2Y4 597 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 INPPL1O15357 1258 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 ABCD1P33897 745 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 IRS1P35568 1242 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 CASP5P51878 434 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 GRIK3Q13003 919 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 CUL4BQ13620 913 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 CAMK1Q14012 370 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 TMEM173Q86WV6 379 aaPredicted RBP20.41■□□□□ 0.86
SHH-203ENST00000435425 MAP4K3Q8IVH8 894 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 COLGALT2Q8IYK4 626 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 RABGGTAQ92696 567 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 PAGE5Q96GU1 130 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 TMEM169Q96HH4 297 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 ACAP3Q96P50 834 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 HAPLN2Q9GZV7 340 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 ST6GALNAC4Q9H4F1 302 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 PRG3Q9Y2Y8 225 aaPredicted RBP20.41■□□□□ 0.86
SHH-203ENST00000435425 PCDHGC5Q9Y5F6 944 aa20.41■□□□□ 0.86
SHH-203ENST00000435425 TISP43B9A030 160 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 ANKRD63C9JTQ0 380 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 PTGESO14684 152 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 NRP1O14786 923 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 PRPF6O94906 941 aaKnown RBP20.4■□□□□ 0.86
SHH-203ENST00000435425 CA8P35219 290 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 ERVFC1P60507 584 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 PLCB3Q01970 1234 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 UBE3AQ05086 875 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 MCL1Q07820 350 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 KCNA1Q09470 495 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 TIGD5Q53EQ6 642 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 TCEAL5Q5H9L2 206 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 GLRA4Q5JXX5 417 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 BCL7CQ8WUZ0 217 aaPredicted RBP20.4■□□□□ 0.86
SHH-203ENST00000435425 KCNN1Q92952 543 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 ACCSQ96QU6 501 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 TMEM175Q9BSA9 504 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 NSUN3Q9H649 340 aaKnown RBP20.4■□□□□ 0.86
SHH-203ENST00000435425 TLR9Q9NR96 1032 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 OLFML3Q9NRN5 406 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 CACNG4Q9UBN1 327 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 USP25Q9UHP3 1055 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 PCDHB13Q9Y5F0 798 aa20.4■□□□□ 0.86
SHH-203ENST00000435425 TRANK1O15050 2925 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 PPP1R37O75864 691 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 PIGRP01833 764 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 THP07101 528 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 L1TD1Q5T7N2 865 aaKnown RBP20.39■□□□□ 0.85
SHH-203ENST00000435425 PLPP4Q5VZY2 271 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 SLC39A4Q6P5W5 647 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 UNC13DQ70J99 1090 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 SYCP3Q8IZU3 236 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 GLIS3Q8NEA6 775 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 HVCN1Q96D96 273 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 IGSF21Q96ID5 467 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 MSTO1Q9BUK6 570 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 IGFLR1Q9H665 355 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 ENTPD7Q9NQZ7 604 aa20.39■□□□□ 0.85
SHH-203ENST00000435425 TOPORSQ9NS56 1045 aaPredicted RBP20.39■□□□□ 0.85
SHH-203ENST00000435425 ZMYM2Q9UBW7 1377 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 CASTOR2A6NHX0 329 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 NR1I2O75469 434 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 TNFSF9P41273 254 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 DSC1Q08554 894 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 CNNM4Q6P4Q7 775 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 EP400NLQ6ZTU2 488 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 TMC7Q7Z402 723 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 TCF25Q9BQ70 676 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 STRA6Q9BX79 667 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 EXOC7Q9UPT5 735 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 LZTS1Q9Y250 596 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 MYO7AQ13402 2215 aa20.38■□□□□ 0.85
SHH-203ENST00000435425 CARNS1A5YM72 827 aa20.37■□□□□ 0.85
SHH-203ENST00000435425 F8W810 466 aa20.37■□□□□ 0.85
SHH-203ENST00000435425 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
SHH-203ENST00000435425 ZNF202O95125 648 aa20.37■□□□□ 0.85
SHH-203ENST00000435425 TUSC3Q13454 348 aa20.37■□□□□ 0.85
SHH-203ENST00000435425 FAM26FQ5R3K3 315 aa20.37■□□□□ 0.85
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