RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 NOLC1Q14978 699 aaKnown RBP eCLIP20.12■□□□□ 0.81
HLA-F-220ENST00000434407 ZC2HC1CQ53FD0 456 aaPredicted RBP20.12■□□□□ 0.81
HLA-F-220ENST00000434407 SLC39A4Q6P5W5 647 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 COLGALT2Q8IYK4 626 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 CEP57L1Q8IYX8 460 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 CEP120Q8N960 986 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 FSIP1Q8NA03 581 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 MRPS27Q92552 414 aaKnown RBP20.12■□□□□ 0.81
HLA-F-220ENST00000434407 TMEM175Q9BSA9 504 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 HAPLN2Q9GZV7 340 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 GOLPH3LQ9H4A5 285 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 MRPL44Q9H9J2 332 aaKnown RBP20.12■□□□□ 0.81
HLA-F-220ENST00000434407 SPG21Q9NZD8 308 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 DNAJB4Q9UDY4 337 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 UNC80Q8N2C7 3258 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 PTGESO14684 152 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 ZC3H11AO75152 810 aaKnown RBP eCLIP20.11■□□□□ 0.81
HLA-F-220ENST00000434407 ALDH7A1P49419 539 aaKnown RBP20.11■□□□□ 0.81
HLA-F-220ENST00000434407 ASIC1P78348 528 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 GRIK3Q13003 919 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 ALCAMQ13740 583 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 XKR4Q5GH76 650 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 ALKAL1Q6UXT8 129 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 THNSL1Q8IYQ7 743 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 PAGE5Q96GU1 130 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 TCHPQ9BT92 498 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 KLK14Q9P0G3 267 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 STYXL1Q9Y6J8 313 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 A0A0C4DFX4 3053 aa20.11■□□□□ 0.81
HLA-F-220ENST00000434407 PVALEFA0A1B0GWK0 134 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 HNRNPDLO14979 420 aaKnown RBP20.1■□□□□ 0.81
HLA-F-220ENST00000434407 CLDN3O15551 220 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 FAM189A1O60320 539 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 SLC11A1P49279 550 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 LIG4P49917 911 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 CASP5P51878 434 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 L1TD1Q5T7N2 865 aaKnown RBP20.1■□□□□ 0.81
HLA-F-220ENST00000434407 UNC13DQ70J99 1090 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 ZBTB33Q86T24 672 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 POF1BQ8WVV4 589 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 BICD1Q96G01 975 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 FGFBP2Q9BYJ0 223 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 CXCL16Q9H2A7 254 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 TBC1D7Q9P0N9 293 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 GDAQ9Y2T3 454 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 PCDHB13Q9Y5F0 798 aa20.1■□□□□ 0.81
HLA-F-220ENST00000434407 A0A0B4J269 797 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 MYL1P05976 194 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 MYBP10242 640 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 CASP1P29466 404 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 AFMP43652 599 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 CUL4BQ13620 913 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 NAB2Q15742 525 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 TIGD5Q53EQ6 642 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 TMEM173Q86WV6 379 aaPredicted RBP20.09■□□□□ 0.81
HLA-F-220ENST00000434407 GRAMD1CQ8IYS0 662 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 IGSF21Q96ID5 467 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 FAM193BQ96PV7 902 aaPredicted RBP20.09■□□□□ 0.81
HLA-F-220ENST00000434407 RPS6KC1Q96S38 1066 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 CCDC94Q9BW85 323 aaPredicted RBP20.09■□□□□ 0.81
HLA-F-220ENST00000434407 GBP3Q9H0R5 595 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 ANKFY1Q9P2R3 1169 aa20.09■□□□□ 0.81
HLA-F-220ENST00000434407 XIRP2A4UGR9 3374 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 ANK1P16157 1881 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 NT5C1B-RDH14C9J2C7 533 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 ANKRD63C9JTQ0 380 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 FSCN2O14926 492 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 MEFVO15553 781 aaPredicted RBP20.08■□□□□ 0.81
HLA-F-220ENST00000434407 KLRC4O43908 158 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 ZNF202O95125 648 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 GCNT3O95395 438 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 ALDH2P05091 517 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 KCNA1Q09470 495 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 EPM2AIP1Q7L775 607 aaPredicted RBP20.08■□□□□ 0.81
HLA-F-220ENST00000434407 BCL7CQ8WUZ0 217 aaPredicted RBP20.08■□□□□ 0.81
HLA-F-220ENST00000434407 ACAP3Q96P50 834 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 PPP1R10Q96QC0 940 aaKnown RBP20.08■□□□□ 0.81
HLA-F-220ENST00000434407 ACCSQ96QU6 501 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 BLZF1Q9H2G9 400 aa20.08■□□□□ 0.81
HLA-F-220ENST00000434407 TOPORSQ9NS56 1045 aaPredicted RBP20.08■□□□□ 0.81
HLA-F-220ENST00000434407 NRP1O14786 923 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 EFEMP2O95967 443 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 THP07101 528 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 KRT17Q04695 432 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 CCDC85BQ15834 202 aaPredicted RBP20.07■□□□□ 0.8
HLA-F-220ENST00000434407 KYAT1Q16773 422 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 PDE12Q6L8Q7 609 aaKnown RBP20.07■□□□□ 0.8
HLA-F-220ENST00000434407 KRBA2Q6ZNG9 492 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 FMR1NBQ8N0W7 255 aaPredicted RBP20.07■□□□□ 0.8
HLA-F-220ENST00000434407 GLIS3Q8NEA6 775 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 ENGASEQ8NFI3 743 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 SNX27Q96L92 541 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 NSUN3Q9H649 340 aaKnown RBP20.07■□□□□ 0.8
HLA-F-220ENST00000434407 TLR9Q9NR96 1032 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 PUF60Q9UHX1 559 aaKnown RBP20.07■□□□□ 0.8
HLA-F-220ENST00000434407 EXOC7Q9UPT5 735 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 FAN1Q9Y2M0 1017 aa20.07■□□□□ 0.8
HLA-F-220ENST00000434407 OGTO15294 1046 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 EIF3DO15371 548 aaKnown RBP eCLIP20.06■□□□□ 0.8
HLA-F-220ENST00000434407 ADRB2P07550 413 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms