RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 DEPTORQ8TB45 409 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 IFT74Q96LB3 600 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 PIDD1Q9HB75 910 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 MIOSQ9NXC5 875 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 FBXL21Q9UKT6 434 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 CLUHO75153 1309 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 PHLPP2Q6ZVD8 1323 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 H3BQV1 296 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 ACKR2O00590 384 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 MED24O75448 989 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 PDGFBP01127 241 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 THP07101 528 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 CYP11B2P19099 503 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 DCAF4L1Q3SXM0 396 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 PADI6Q6TGC4 694 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 TAS1R1Q7RTX1 841 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 GSTCDQ8NEC7 633 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 RIN2Q8WYP3 895 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 SMG7Q92540 1137 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 KIFAP3Q92845 792 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 KCNK12Q9HB15 430 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 GPRC5CQ9NQ84 441 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 ARID2Q68CP9 1835 aa16.42■□□□□ 0.22
RPUSD3-208ENST00000433972 WNT7AO00755 349 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 PAPLNO95428 1278 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 PRKCBP05771 671 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 GJB2P29033 226 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 TTC38Q5R3I4 469 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 CDR2LQ86X02 465 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 RTP3Q9BQQ7 232 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 TTPALQ9BTX7 342 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 GPR62Q9BZJ7 368 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 KLK14Q9P0G3 267 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 EPS15L1Q9UBC2 864 aa16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 ZFP37Q9Y6Q3 630 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-208ENST00000433972 TGM5O43548 720 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 GFRA3O60609 400 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 PDCP20941 246 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 ZNF174Q15697 407 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 LARP1BQ659C4 914 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 HSCBQ8IWL3 235 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 FLCNQ8NFG4 579 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 SNX21Q969T3 373 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 PRKD2Q9BZL6 878 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 NT5C3AQ9H0P0 336 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 PDZD7Q9H5P4 517 aa16.4■□□□□ 0.22
RPUSD3-208ENST00000433972 A0A087WWV3 80 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 H0Y858 1186 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 K7ELQ4 463 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 RFPL2O75678 378 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 RECQL4O94761 1208 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 RFX1P22670 979 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 CCT6AP40227 531 aaKnown RBP16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 CUL4AQ13619 759 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 PDIA5Q14554 519 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 MCTP1Q6DN14 999 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 TMEM105Q8N8V8 129 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 PIK3R5Q8WYR1 880 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 PHOX2BQ99453 314 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 SMOC2Q9H3U7 446 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 SNTG2Q9NY99 539 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 WNT16Q9UBV4 365 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 LRWD1Q9UFC0 647 aa16.39■□□□□ 0.21
RPUSD3-208ENST00000433972 ZDBF2Q9HCK1 2354 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 KMT2EQ8IZD2 1858 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 F8W810 466 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 LAD1O00515 517 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 TRAPPC3O43617 180 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 ZMYND10O75800 440 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 HNRNPA1P09651 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 LIG1P18858 919 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 AOC1P19801 751 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 FAM171A1Q5VUB5 890 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 LILRA6Q6PI73 481 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 RTL10Q7L3V2 364 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 INTS4Q96HW7 963 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 UROC1Q96N76 676 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 CCDC113Q9H0I3 377 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 BHMT2Q9H2M3 363 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 FAM86C1Q9NVL1 165 aa16.38■□□□□ 0.21
RPUSD3-208ENST00000433972 CASTOR2A6NHX0 329 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 K7ERI5 159 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 XYLBO75191 536 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 KIF4AO95239 1232 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 SRFP11831 508 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 HOXA9P31269 272 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 YARSP54577 528 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 PSMD5Q16401 504 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms