RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
CTCFL-209ENST00000433949 GGPS1O95749 300 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 TGFB3P10600 412 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 MFAP3P55082 362 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 PEX26Q7Z412 305 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 GPD1LQ8N335 351 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 ZNF302Q9NR11 478 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
CTCFL-209ENST00000433949 ADRB2P07550 413 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 GPC3P51654 580 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 POLGP54098 1239 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 TNNC1P63316 161 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 RHOT2Q8IXI1 618 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 BSNDQ8WZ55 320 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 AGPAT1Q99943 283 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 PRDM10Q9NQV6 1147 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 KCNK3O14649 394 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 OATP04181 439 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 NEDD9Q14511 834 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 TAPT1Q6NXT6 567 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 DAAM2Q86T65 1068 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 USP38Q8NB14 1042 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 USP6NLQ92738 828 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 LENG1Q96BZ8 264 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 RBM12Q9NTZ6 932 aaKnown RBP12.88□□□□□ -0.35
CTCFL-209ENST00000433949 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
CTCFL-209ENST00000433949 IGKV6D-21A0A0A0MT36 114 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 ZC3H11AO75152 810 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTCFL-209ENST00000433949 LRRN2O75325 713 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 GZMAP12544 262 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 ELNP15502 786 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTCFL-209ENST00000433949 EPHB4P54760 987 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 STRN3Q13033 797 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 EMC2Q15006 297 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 CLUL1Q15846 466 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 MAMDC4Q6UXC1 1216 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 ENOSF1Q7L5Y1 443 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
CTCFL-209ENST00000433949 PLEKHO2Q8TD55 490 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 MORC4Q8TE76 937 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 BICD1Q96G01 975 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 APBA2Q99767 749 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 KIFC3Q9BVG8 833 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 NIFKQ9BYG3 293 aaKnown RBP12.87□□□□□ -0.35
CTCFL-209ENST00000433949 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
CTCFL-209ENST00000433949 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
CTCFL-209ENST00000433949 GOLGA8IPA6NC78 632 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 GOLGA8JA6NMD2 632 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 CLSTN1O94985 981 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 RFC5P40937 340 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 NAMPTP43490 491 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 TRIM32Q13049 653 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 MTERF2Q49AM1 385 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SLFN12LQ6IEE8 588 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 KCNV1Q6PIU1 500 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ARHGEF19Q8IW93 802 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 FAM71BQ8TC56 605 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 MS4A14Q96JA4 679 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 NT5C1BQ96P26 610 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ISCUQ9H1K1 167 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ST7Q9NRC1 585 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 TMEM59LQ9UK28 342 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 PACSIN2Q9UNF0 486 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 DNAH12Q6ZR08 3092 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms