RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 ACAP3Q96P50 834 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 TMEM161AQ9NX61 479 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 CGNQ9P2M7 1197 aaKnown RBP16.73■□□□□ 0.27
CNOT9-205ENST00000433439 TRAF3IP3Q9Y228 551 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 INPP5FQ9Y2H2 1132 aa16.73■□□□□ 0.27
CNOT9-205ENST00000433439 ZNF623O75123 536 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 RPL13P26373 211 aaKnown RBP16.72■□□□□ 0.27
CNOT9-205ENST00000433439 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
CNOT9-205ENST00000433439 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 ADAM9Q13443 819 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 AGMOQ6ZNB7 445 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 FAM43BQ6ZT52 329 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-205ENST00000433439 MRPL10Q7Z7H8 261 aaKnown RBP16.72■□□□□ 0.27
CNOT9-205ENST00000433439 ABI1Q8IZP0 508 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 XXYLT1Q8NBI6 393 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 HELQQ8TDG4 1101 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 RPF1Q9H9Y2 349 aaKnown RBP16.72■□□□□ 0.27
CNOT9-205ENST00000433439 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
CNOT9-205ENST00000433439 CETN3O15182 167 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 EXTL3O43909 919 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 EOMESO95936 686 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 LDHAP00338 332 aaKnown RBP16.71■□□□□ 0.27
CNOT9-205ENST00000433439 CLTAP09496 248 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 CXCL8P10145 99 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 ATP2A2P16615 1042 aaKnown RBP16.71■□□□□ 0.27
CNOT9-205ENST00000433439 MLH1P40692 756 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 CASP4P49662 377 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 PAN2Q504Q3 1202 aaKnown RBP16.71■□□□□ 0.27
CNOT9-205ENST00000433439 TTI2Q6NXR4 508 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 ZNF598Q86UK7 904 aaKnown RBP16.71■□□□□ 0.27
CNOT9-205ENST00000433439 CBWD2Q8IUF1 395 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 TOP1MTQ969P6 601 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 GAD1Q99259 594 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 ELAC1Q9H777 363 aaKnown RBP16.71■□□□□ 0.27
CNOT9-205ENST00000433439 RSAD1Q9HA92 442 aa16.71■□□□□ 0.27
CNOT9-205ENST00000433439 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
CNOT9-205ENST00000433439 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 FKBP3Q00688 224 aaKnown RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 SPAG1Q07617 926 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 KYAT1Q16773 422 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 EDRF1Q3B7T1 1238 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 CRELD2Q6UXH1 353 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 SLC9A7Q96T83 725 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 DUSP9Q99956 384 aaKnown RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 FUCA2Q9BTY2 467 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 TOPORSQ9NS56 1045 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 RBAKQ9NYW8 714 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 CPSF3Q9UKF6 684 aaKnown RBP16.7■□□□□ 0.26
CNOT9-205ENST00000433439 FRMD4BQ9Y2L6 1034 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 TTC3P53804 2025 aa16.7■□□□□ 0.26
CNOT9-205ENST00000433439 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 TBKBP1A7MCY6 615 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 GRXCR1A8MXD5 290 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 FAM189A1O60320 539 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 POMCP01189 267 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 ADRB2P07550 413 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
CNOT9-205ENST00000433439 RABGGTBP53611 331 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 PPP2R3AQ06190 1150 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 ENOX2Q16206 610 aaKnown RBP16.69■□□□□ 0.26
CNOT9-205ENST00000433439 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
CNOT9-205ENST00000433439 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 CLLU1OSQ5K130 101 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 MED15Q96RN5 788 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 YME1L1Q96TA2 773 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
CNOT9-205ENST00000433439 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 KIAA1586Q9HCI6 787 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 DMAC2Q9NW81 257 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 GIT1Q9Y2X7 761 aa16.69■□□□□ 0.26
CNOT9-205ENST00000433439 ARL5CA6NH57 179 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 HOXA2O43364 376 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 OFD1O75665 1012 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 AKAP3O75969 853 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 BMP8BP34820 402 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 SCNN1GP51170 649 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
CNOT9-205ENST00000433439 NFIL3Q16649 462 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 SLC10A6Q3KNW5 377 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 CCDC40Q4G0X9 1142 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 HSP90AA4PQ58FG1 418 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 RASIP1Q5U651 963 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 FAM109BQ6ICB4 259 aaPredicted RBP16.68■□□□□ 0.26
CNOT9-205ENST00000433439 SLC9A9Q8IVB4 645 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 FAM186BQ8IYM0 893 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 TDHQ8IZJ6 230 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms