RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 FOXD4L1Q9NU39 408 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 MEIS1O00470 390 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 PTMAP06454 111 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 CLTAP09496 248 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 GRIK1P39086 918 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 SIM2Q14190 667 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TEAD4Q15561 434 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 PTPN21Q16825 1174 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 UAP1L1Q3KQV9 507 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 HERC4Q5GLZ8 1057 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 DGKKQ5KSL6 1271 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TDRD10Q5VZ19 366 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 BRAPQ7Z569 592 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 SNX19Q92543 992 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 MCRS1Q96EZ8 462 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 MSANTD3Q96H12 275 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 NUSAP1Q9BXS6 441 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 UNC45AQ9H3U1 944 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 KIAA1586Q9HCI6 787 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 CEP290O15078 2479 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TRAV19A0A0A6YYK7 116 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 NBNO60934 754 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 SOD2P04179 222 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 FGFR4P22455 802 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 RECQLP46063 649 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 GPC3P51654 580 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 PLA2G4FQ68DD2 849 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 UBE2Q1Q7Z7E8 422 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 C4orf19Q8IY42 314 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 SLC43A3Q8NBI5 491 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 HASPINQ8TF76 798 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 HDAC7Q8WUI4 952 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 DEPDC1BQ8WUY9 529 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TM6SF1Q9BZW5 370 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 EPC1Q9H2F5 836 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 DYRK4Q9NR20 520 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 ZDHHC7Q9NXF8 308 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 GOLGA6L6A8MZA4 724 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CALUO43852 315 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 NFKBIAP25963 317 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 NAMPTP43490 491 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 DHPSP49366 369 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TAF6P49848 677 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 EPHB4P54760 987 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 PRKCQQ04759 706 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TMEM132DQ14C87 1099 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TPRG1Q6ZUI0 275 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TMCO2Q7Z6W1 182 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 RUBCNQ92622 972 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 EDAQ92838 391 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ZMYND12Q9H0C1 365 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ADAM7Q9H2U9 754 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 PARVGQ9HBI0 331 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 PCDHB5Q9Y5E4 795 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 A0A0U1RQF3 1178 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 OR6C75A6NL08 312 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 KIAA0391O15091 583 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 EXOC3O60645 756 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 IL18RAPO95256 599 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CTSAP10619 480 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ZNF18P17022 549 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 GDI1P31150 447 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 RPL9P32969 192 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TROAPQ12815 778 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 UVSSAQ2YD98 709 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ARHGAP29Q52LW3 1261 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 FOXD4L5Q5VV16 416 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 VN1R2Q8NFZ6 395 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 OR6B3Q8NGW1 331 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 IL31RAQ8NI17 732 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CYP2W1Q8TAV3 490 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 SLC7A14Q8TBB6 771 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 PIGOQ8TEQ8 1089 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 FOXD4L4Q8WXT5 416 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 LPPQ93052 612 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 IGSF21Q96ID5 467 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 AK8Q96MA6 479 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 BCAS3Q9H6U6 928 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TBC1D17Q9HA65 648 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 C17orf75Q9HAS0 396 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 NFATC1O95644 943 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 APODP05090 189 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CYP3A4P08684 503 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 OR1D2P34982 312 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ZXDAP98168 799 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 DUSP6Q16828 381 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC40Q4G0X9 1142 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 RTL10Q7L3V2 364 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC60Q8IWA6 550 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 KCTD17Q8N5Z5 321 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC114Q96M63 670 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 PNMA5Q96PV4 448 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CHMP5Q9NZZ3 219 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 IPO11Q9UI26 975 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 NCKAP1Q9Y2A7 1128 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 USTQ9Y2C2 406 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ITGB1P05556 798 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 RAD51AP2Q09MP3 1159 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 OVOS1Q6IE37 1185 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms