RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 PAPLNO95428 1278 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 NPR3P17342 541 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 AOC1P19801 751 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 RPA1P27694 616 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 PRPF4BQ13523 1007 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 MAPK6Q16659 721 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 LILRA6Q6PI73 481 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 PADI6Q6TGC4 694 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 SIX5Q8N196 739 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 RSAD2Q8WXG1 361 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 MYADMQ96S97 322 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 PAAF1Q9BRP4 392 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 PRKD2Q9BZL6 878 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 PDZD7Q9H5P4 517 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 SNTG2Q9NY99 539 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 EPS15L1Q9UBC2 864 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 CACNG4Q9UBN1 327 aa16.73■□□□□ 0.27
CSNK1E-208ENST00000431611 DENND4AQ7Z401 1863 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 CASTOR2A6NHX0 329 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 PI15O43692 258 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 PRKCBP05771 671 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 OR52Z1P0C646 297 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 LIG1P18858 919 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 CYP11B2P19099 503 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 ORC2Q13416 577 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 ZNF174Q15697 407 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 PRSS55Q6UWB4 352 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 DEPTORQ8TB45 409 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 BSNDQ8WZ55 320 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 NXPE3Q969Y0 559 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 C8orf76Q96K31 380 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 RTP3Q9BQQ7 232 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 ADPGKQ9BRR6 497 aa16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSNK1E-208ENST00000431611 MYO10Q9HD67 2058 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 ACKR2O00590 384 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 PTGESO14684 152 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 ZMYND10O75800 440 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 RECQL4O94761 1208 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 THP07101 528 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 CFHP08603 1231 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 NBL1P41271 181 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 NAMPTP43490 491 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 PPP2R5AQ15172 486 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 CEP57Q86XR8 500 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 NOSTRINQ8IVI9 506 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 CCDC83Q8IWF9 413 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 SLC44A3Q8N4M1 653 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 HASPINQ8TF76 798 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 TTPALQ9BTX7 342 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 WNT16Q9UBV4 365 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 LIMCH1Q9UPQ0 1083 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 USP20Q9Y2K6 914 aa16.71■□□□□ 0.27
CSNK1E-208ENST00000431611 STK25O00506 426 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 KIF4AO95239 1232 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 LAMP2P13473 410 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 HAUS3Q68CZ6 603 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 GET4Q7L5D6 327 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 PIK3R5Q8WYR1 880 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 CCDC113Q9H0I3 377 aa16.7■□□□□ 0.26
CSNK1E-208ENST00000431611 SEC24BO95487 1268 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 SRFP11831 508 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 MUTP22033 750 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 NAB2Q15742 525 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 PSMD5Q16401 504 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 TTC38Q5R3I4 469 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 LIN9Q5TKA1 542 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 EEF1DP3Q658K8 133 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 DTWD2Q8NBA8 298 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 IFT74Q96LB3 600 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 LLPHQ9BRT6 129 aaKnown RBP16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 FBXW11Q9UKB1 542 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 CA14Q9ULX7 337 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 GDAQ9Y2T3 454 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
CSNK1E-208ENST00000431611 KRBA1A5PL33 1030 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 PRR23AA6NEV1 266 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 EDN1P05305 212 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 RFX1P22670 979 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 FSHRP23945 695 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 EFNA5P52803 228 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 DCAF4L1Q3SXM0 396 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 PDXDC1Q6P996 788 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 GRASPQ7Z6J2 395 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 FRMD5Q7Z6J6 570 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 FBXO18Q8NFZ0 1043 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms