RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 E2F8A0AVK6 867 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 GAGE12BA1L429 117 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 GAGE12HA6NDE8 117 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 KRT37O76014 449 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 FSBPO95073 299 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 EYA4O95677 639 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 U2AF1L5P0DN76 240 aaPredicted RBP2.9□□□□□ -1.95
CDC40-204ENST00000431461 TYRP1P17643 537 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 VCAM1P19320 739 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 CDK11BP21127 795 aaKnown RBP2.9□□□□□ -1.95
CDC40-204ENST00000431461 BMPR1AP36894 532 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 ADCYAP1R1P41586 468 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 SEC24CP53992 1094 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 FAM189BP81408 668 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 U2AF1Q01081 240 aaKnown RBP eCLIP2.9□□□□□ -1.95
CDC40-204ENST00000431461 STAT4Q14765 748 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 PCBP1Q15365 356 aaKnown RBP eCLIP2.9□□□□□ -1.95
CDC40-204ENST00000431461 ERCC6LQ2NKX8 1250 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 FAM214AQ32MH5 1076 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 KANSL1Q7Z3B3 1105 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 AMOTL1Q8IY63 956 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 OR52N2Q8NGI0 321 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 PPP1R14CQ8TAE6 165 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 CHTF18Q8WVB6 975 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 CAVIN3Q969G5 261 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 FERMT2Q96AC1 680 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 RAX2Q96IS3 184 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 TUBGCP5Q96RT8 1024 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 NDC1Q9BTX1 674 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 PITHD1Q9GZP4 211 aaPredicted RBP2.9□□□□□ -1.95
CDC40-204ENST00000431461 SLC5A4Q9NY91 659 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 EIF2B4Q9UI10 523 aaKnown RBP2.9□□□□□ -1.95
CDC40-204ENST00000431461 NOC2LQ9Y3T9 749 aaKnown RBP2.9□□□□□ -1.95
CDC40-204ENST00000431461 MRFAP1Q9Y605 127 aa2.9□□□□□ -1.95
CDC40-204ENST00000431461 PHLDB1Q86UU1 1377 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 FAM83GA6ND36 823 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 ZNF891A8MT65 544 aaPredicted RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 RNASET2O00584 256 aaKnown RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 XPAP23025 273 aaPredicted RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 CXCR5P32302 372 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 SLC5A3P53794 718 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 NRG3P56975 720 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 TMPRSS15P98073 1019 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 FOXF2Q12947 444 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 TERF2Q15554 542 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 SEPT7Q16181 437 aaKnown RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 PRAMEF9Q5VWM5 478 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 KIAA1841Q6NSI8 718 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 DOK3Q7L591 496 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 GDF7Q7Z4P5 450 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 DDX42Q86XP3 938 aaKnown RBP eCLIP2.89□□□□□ -1.95
CDC40-204ENST00000431461 ZNF366Q8N895 744 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 AHCYL2Q96HN2 611 aaKnown RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 GPR101Q96P66 508 aaPredicted RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 UIMC1Q96RL1 719 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 SOX7Q9BT81 388 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 LSM14BQ9BX40 385 aaKnown RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 EPC1Q9H2F5 836 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 AKIP1Q9NQ31 210 aa2.89□□□□□ -1.95
CDC40-204ENST00000431461 COL3A1P02461 1466 aaPredicted RBP2.89□□□□□ -1.95
CDC40-204ENST00000431461 PIPSLA2A3N6 862 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 UNC119BA6NIH7 251 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 DIRC3C9JPN6 131 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 NEMP1O14524 444 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 NRP1O14786 923 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 PPM1GO15355 546 aaPredicted RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 KCNAB3O43448 404 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 HKR1P10072 659 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 GAAP10253 952 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 APOBEC3AP31941 199 aaPredicted RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 GUCY2FP51841 1108 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 WNT3AP56704 352 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 BLOC1S1P78537 153 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 AMPD3Q01432 767 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 MEF2AQ02078 507 aaPredicted RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 NHLH1Q02575 133 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 ADCY2Q08462 1091 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 FOXI1Q12951 378 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 MRPL49Q13405 166 aaKnown RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 MYBPC3Q14896 1274 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 ANO4Q32M45 955 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 BEAN1Q3B7T3 259 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 BROXQ5VW32 411 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 GPRIN1Q7Z2K8 1008 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 C1QL2Q7Z5L3 287 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 ARHGEF25Q86VW2 580 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 SRRM1Q8IYB3 904 aaKnown RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 NXPE1Q8N323 547 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 SIMC1Q8NDZ2 872 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 SLC9A6Q92581 669 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 HIST1H2AHQ96KK5 128 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 ELF4Q99607 663 aaPredicted RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 HIST1H2AJQ99878 128 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 C1QTNF7Q9BXJ2 289 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 CPEB1Q9BZB8 566 aaKnown RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 ALG13Q9NP73 1137 aaKnown RBP2.88□□□□□ -1.95
CDC40-204ENST00000431461 SPTLC3Q9NUV7 552 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 ING3Q9NXR8 418 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 TRPM5Q9NZQ8 1165 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 ZBTB21Q9ULJ3 1066 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms