RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 RPF1Q9H9Y2 349 aaKnown RBP11.99□□□□□ -0.49
CHD4-202ENST00000430771 RSAD1Q9HA92 442 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 UBN1Q9NPG3 1134 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 PCDHB7Q9Y5E2 793 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 TNRC18O15417 2968 aaPredicted RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 ANK1P16157 1881 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 COL4A6Q14031 1691 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 H0YGN5 161 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 ENPP3O14638 875 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 MAPK13O15264 365 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 FAM189A1O60320 539 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 RECQL4O94761 1208 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 GNA14O95837 355 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 PMS1P54277 932 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 EPHB4P54760 987 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 MYL5Q02045 173 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 ADAM9Q13443 819 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 SURF1Q15526 300 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 SNRNP35Q16560 246 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 CEP135Q66GS9 1140 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 ANKRD40Q6AI12 368 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 LRRC55Q6ZSA7 311 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 MRPL10Q7Z7H8 261 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 FAM114A1Q8IWE2 563 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 CD302Q8IX05 232 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 ABI1Q8IZP0 508 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 CEP120Q8N960 986 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 SMG8Q8ND04 991 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 ENOX1Q8TC92 643 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 SNX27Q96L92 541 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 RNPC3Q96LT9 517 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 FBXL18Q96ME1 805 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 FAM213AQ9BRX8 229 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 UBE2OQ9C0C9 1292 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 HAPLN2Q9GZV7 340 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 PARP2Q9UGN5 583 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 CPSF3Q9UKF6 684 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 GIT1Q9Y2X7 761 aa11.98□□□□□ -0.49
CHD4-202ENST00000430771 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 TDRD15B5MCY1 1934 aaKnown RBP11.98□□□□□ -0.49
CHD4-202ENST00000430771 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 SMTNL1A8MU46 457 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 BECN2A8MW95 431 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 IL18RAPO95256 599 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 CXCL8P10145 99 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 ATF7P17544 494 aaPredicted RBP11.97□□□□□ -0.49
CHD4-202ENST00000430771 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
CHD4-202ENST00000430771 ACOT2P49753 483 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 ZNF165P49910 485 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 OSTNP61366 133 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 TPM4P67936 248 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 FAM189BP81408 668 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 CCDC40Q4G0X9 1142 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 SPATA1Q5VX52 437 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHD4-202ENST00000430771 INTS8Q75QN2 995 aaKnown RBP11.97□□□□□ -0.49
CHD4-202ENST00000430771 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 ZNF598Q86UK7 904 aaKnown RBP11.97□□□□□ -0.49
CHD4-202ENST00000430771 RTN4RL1Q86UN2 441 aaPredicted RBP11.97□□□□□ -0.49
CHD4-202ENST00000430771 FAM186BQ8IYM0 893 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 PHOSPHO2Q8TCD6 241 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 FAM200AQ8TCP9 573 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 URGCPQ8TCY9 931 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 GDF15Q99988 308 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 MRPL9Q9BYD2 267 aaKnown RBP11.97□□□□□ -0.49
CHD4-202ENST00000430771 DMAC2Q9NW81 257 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 HES2Q9Y543 173 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 SLC4A7Q9Y6M7 1214 aa11.97□□□□□ -0.49
CHD4-202ENST00000430771 FNDC1Q4ZHG4 1894 aaPredicted RBP11.96□□□□□ -0.49
CHD4-202ENST00000430771 PDE4DIPQ5VU43 2346 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 IKBKBO14920 756 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.49
CHD4-202ENST00000430771 ADRB2P07550 413 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 KRT13P13646 458 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 MLH1P40692 756 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 TNFSF9P41273 254 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 DEFB103AP81534 67 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 ENPEPQ07075 957 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 SEZ6Q53EL9 994 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 ZBTB41Q5SVQ8 909 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 NT5DC4Q86YG4 428 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 CBWD2Q8IUF1 395 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 AOPEPQ8N6M6 819 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 LPPQ93052 612 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 FNBP1Q96RU3 617 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 TSPAN18Q96SJ8 248 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.49
CHD4-202ENST00000430771 TMEM117Q9H0C3 514 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms