RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 TUSC1Q2TAM9 212 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 NAALADL2Q58DX5 795 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 SPOUT1Q5T280 376 aaKnown RBP7.3□□□□□ -1.24
SMC6-205ENST00000430591 KRT79Q5XKE5 535 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 HAUS3Q68CZ6 603 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
SMC6-205ENST00000430591 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 SRGAP1Q7Z6B7 1085 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 GPBP1Q86WP2 473 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 CMTR2Q8IYT2 770 aaKnown RBP7.3□□□□□ -1.24
SMC6-205ENST00000430591 VN1R2Q8NFZ6 395 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 ERMNQ8TAM6 284 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 SPPL3Q8TCT6 385 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 TCP11Q8WWU5 503 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 FAM84AQ96KN4 292 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 PDZD7Q9H5P4 517 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 IGFLR1Q9H665 355 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 NRDE2Q9H7Z3 1164 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 C1orf112Q9NSG2 853 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 TBC1D13Q9NVG8 400 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 IPPQ9Y573 584 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 ANK1P16157 1881 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 PLXNA3P51805 1871 aa7.3□□□□□ -1.24
SMC6-205ENST00000430591 PDCD11Q14690 1871 aaKnown RBP7.3□□□□□ -1.24
SMC6-205ENST00000430591 VWA8A3KMH1 1905 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 CCDC169A6NNP5 214 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 HIDE1A8MVS5 230 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 C5orf67F2Z3F1 127 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 H3BQ06 376 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 PER2O15055 1255 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 SIAH2O43255 324 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 ZC3H11AO75152 810 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMC6-205ENST00000430591 FGF18O76093 207 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 ERLIN2O94905 339 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 RPLP2P05387 115 aaKnown RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 ZSCAN22P10073 491 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 MYBP10242 640 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 XRCC6P12956 609 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMC6-205ENST00000430591 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 NMT1P30419 496 aaKnown RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 MLH1P40692 756 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 NPTX2P47972 431 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 SCNN1GP51170 649 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 OSTNP61366 133 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 HYAL1Q12794 435 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 MXD4Q14582 209 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 SLC39A14Q15043 492 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 ARL6IP4Q66PJ3 421 aaKnown RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 KANK3Q6NY19 840 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 SHC4Q6S5L8 630 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 TAS1R1Q7RTX1 841 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 MRPL10Q7Z7H8 261 aaKnown RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 ZBTB33Q86T24 672 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 RBM23Q86U06 439 aaKnown RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 GRAMD1CQ8IYS0 662 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 PDILTQ8N807 584 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 SYT2Q8N9I0 419 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 LINC00301Q8NCQ3 95 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 GLIS3Q8NEA6 775 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 GSTCDQ8NEC7 633 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 ZSWIM2Q8NEG5 633 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 POF1BQ8WVV4 589 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 BAP1Q92560 729 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 RAD54LQ92698 747 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 HPS3Q969F9 1004 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 B3GALT6Q96L58 329 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 FIZ1Q96SL8 496 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 GAD1Q99259 594 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 JPH2Q9BR39 696 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 REEP2Q9BRK0 252 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 PAAF1Q9BRP4 392 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 TARS2Q9BW92 718 aaKnown RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 COL25A1Q9BXS0 654 aaPredicted RBP7.29□□□□□ -1.24
SMC6-205ENST00000430591 TMEM117Q9H0C3 514 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 FZD8Q9H461 694 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 DNM3Q9UQ16 869 aa7.29□□□□□ -1.24
SMC6-205ENST00000430591 CITO14578 2027 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 DOCK6Q96HP0 2047 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 TTC28Q96AY4 2481 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 MYMKA6NI61 221 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 LAD1O00515 517 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 ABLIM1O14639 778 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 PTGESO14684 152 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 GAS2O43903 313 aaKnown RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 TBX10O75333 385 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 GLP2RO95838 553 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 HSP90AA1P07900 732 aaKnown RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 HARSP12081 509 aaKnown RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 NCLP19338 710 aaKnown RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 PDCP20941 246 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 LONP1P36776 959 aaKnown RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 LTBRP36941 435 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 NAMPTP43490 491 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 NASPP49321 788 aaPredicted RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 CASP5P51878 434 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 GIT2Q14161 759 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 TFDP1Q14186 410 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 ZC2HC1CQ53FD0 456 aaPredicted RBP7.28□□□□□ -1.24
SMC6-205ENST00000430591 NOMO2Q5JPE7 1267 aa7.28□□□□□ -1.24
SMC6-205ENST00000430591 GLRA4Q5JXX5 417 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms