RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CCSER1Q9C0I3 900 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
UBE3D-204ENST00000430071 KANSL3Q9P2N6 904 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 MUTYHQ9UIF7 546 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 GIT1Q9Y2X7 761 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 ANK1P16157 1881 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 SFI1A8K8P3 1242 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 LILRB3O75022 631 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 EFEMP2O95967 443 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 SP100P23497 879 aaPredicted RBP18.66■□□□□ 0.58
UBE3D-204ENST00000430071 KARSQ15046 597 aaKnown RBP18.66■□□□□ 0.58
UBE3D-204ENST00000430071 RINT1Q6NUQ1 792 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 SHC4Q6S5L8 630 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 TAS1R3Q7RTX0 852 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 RNF135Q8IUD6 432 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 DEPTORQ8TB45 409 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 SLC22A17Q8WUG5 538 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 B3GALT6Q96L58 329 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 SNTG2Q9NY99 539 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 IRAK3Q9Y616 596 aa18.66■□□□□ 0.58
UBE3D-204ENST00000430071 ZDBF2Q9HCK1 2354 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 LOC730098B7Z3J9 87 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 ACKR2O00590 384 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 C2CD2LO14523 706 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 HIP1RO75146 1068 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 CNPP09543 421 aaKnown RBP18.65■□□□□ 0.58
UBE3D-204ENST00000430071 IGFBP6P24592 240 aaPredicted RBP18.65■□□□□ 0.58
UBE3D-204ENST00000430071 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 PRPF4BQ13523 1007 aaKnown RBP18.65■□□□□ 0.58
UBE3D-204ENST00000430071 C1orf186Q6ZWK4 172 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 RPGRIP1Q96KN7 1286 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 PRIMPOLQ96LW4 560 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 KLHL5Q96PQ7 755 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 C2orf40Q9H1Z8 148 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 UBN1Q9NPG3 1134 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 DNM3Q9UQ16 869 aa18.65■□□□□ 0.58
UBE3D-204ENST00000430071 PTGESO14684 152 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 SLC26A4O43511 780 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 DCXO43602 365 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 GPR37L1O60883 481 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 MYBP10242 640 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 PLCG1P19174 1290 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 NPTX2P47972 431 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 PEX3P56589 373 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 MAPK6Q16659 721 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 TMEM31Q5JXX7 168 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 RARS2Q5T160 578 aaKnown RBP18.64■□□□□ 0.57
UBE3D-204ENST00000430071 RNF168Q8IYW5 571 aaPredicted RBP18.64■□□□□ 0.57
UBE3D-204ENST00000430071 KIFAP3Q92845 792 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 CALML4Q96GE6 196 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 CDK5RAP3Q96JB5 506 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 PHF7Q9BWX1 381 aaPredicted RBP18.64■□□□□ 0.57
UBE3D-204ENST00000430071 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.57
UBE3D-204ENST00000430071 MUC6Q6W4X9 2439 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 A0A087X0B3 334 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 NPHP3-ACAD11A0A0J9YXS1 232 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 N4BP3O15049 544 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 RECQL4O94761 1208 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 CBX2Q14781 532 aaPredicted RBP18.63■□□□□ 0.57
UBE3D-204ENST00000430071 RESP18Q5W5W9 173 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 CASP10Q92851 521 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 IFT74Q96LB3 600 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 NT5C3AQ9H0P0 336 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 POMKQ9H5K3 350 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 GDAQ9Y2T3 454 aa18.63■□□□□ 0.57
UBE3D-204ENST00000430071 CCDC169A6NNP5 214 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 SOD2P04179 222 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 CACNB1Q02641 598 aaPredicted RBP18.62■□□□□ 0.57
UBE3D-204ENST00000430071 PPP2R5AQ15172 486 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 NAB2Q15742 525 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 CEP120Q8N960 986 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 POP1Q99575 1024 aaKnown RBP18.62■□□□□ 0.57
UBE3D-204ENST00000430071 HERC2P3Q9BVR0 1158 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 BLOC1S4Q9NUP1 217 aa18.62■□□□□ 0.57
UBE3D-204ENST00000430071 WDFY4Q6ZS81 3184 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 FSD2A1L4K1 749 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 CASTOR2A6NHX0 329 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 SLC16A4O15374 487 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 TXLNAP40222 546 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 KIAA0319Q5VV43 1072 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 ADALQ6DHV7 355 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 KCTD17Q8N5Z5 321 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 RASSF8Q8NHQ8 419 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 HASPINQ8TF76 798 aa18.61■□□□□ 0.57
UBE3D-204ENST00000430071 K7ERI5 159 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 SRGAP2BP0DMP2 458 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ALADP13716 330 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 HOXB8P17481 243 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-204ENST00000430071 KLRC2P26717 231 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 CLCN4P51793 760 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 SLC12A3P55017 1021 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 GRIK3Q13003 919 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ARSHQ5FYA8 562 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 HERC4Q5GLZ8 1057 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-204ENST00000430071 GLRA4Q5JXX5 417 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ATF7IP2Q5U623 682 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 FUT10Q6P4F1 479 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 HACE1Q8IYU2 909 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms