RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 PCDHB12Q9Y5F1 795 aa19.11■□□□□ 0.65
CTSD-203ENST00000429746 A0A1B0GVL5 298 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 TISP43B9A030 160 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 K7ENM7 598 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 ZC3H11AO75152 810 aaKnown RBP eCLIP19.1■□□□□ 0.65
CTSD-203ENST00000429746 TBCAO75347 108 aaKnown RBP19.1■□□□□ 0.65
CTSD-203ENST00000429746 TOM1L1O75674 476 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 KRT18P05783 430 aaKnown RBP19.1■□□□□ 0.65
CTSD-203ENST00000429746 MCF2P10911 925 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 GRM5P41594 1212 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 UBE3AQ05086 875 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 MCL1Q07820 350 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 KCNA1Q09470 495 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 TCEAL5Q5H9L2 206 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 MPZL3Q6UWV2 235 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 ADGRD2Q7Z7M1 963 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 FAM178BQ8IXR5 827 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 RNF168Q8IYW5 571 aaPredicted RBP19.1■□□□□ 0.65
CTSD-203ENST00000429746 IQUBQ8NA54 791 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 MRPS27Q92552 414 aaKnown RBP19.1■□□□□ 0.65
CTSD-203ENST00000429746 C7orf25Q9BPX7 421 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 SCAND2PQ9GZW5 306 aaPredicted RBP19.1■□□□□ 0.65
CTSD-203ENST00000429746 AAASQ9NRG9 546 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 KCNG1Q9UIX4 513 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 KCNH3Q9ULD8 1083 aa19.1■□□□□ 0.65
CTSD-203ENST00000429746 C5orf42Q9H799 3197 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 ANKRD63C9JTQ0 380 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 IGFBP6P24592 240 aaPredicted RBP19.09■□□□□ 0.65
CTSD-203ENST00000429746 KCNQ1P51787 676 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 CSPP1Q1MSJ5 1256 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 PUS10Q3MIT2 529 aaKnown RBP19.09■□□□□ 0.65
CTSD-203ENST00000429746 ZNF568Q3ZCX4 644 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 SPOUT1Q5T280 376 aaKnown RBP19.09■□□□□ 0.65
CTSD-203ENST00000429746 THNSL1Q8IYQ7 743 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 GRAMD1CQ8IYS0 662 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 HPS3Q969F9 1004 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 IGSF21Q96ID5 467 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 PAAF1Q9BRP4 392 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 TMEM175Q9BSA9 504 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 NSUN3Q9H649 340 aaKnown RBP19.09■□□□□ 0.65
CTSD-203ENST00000429746 UBE2ZQ9H832 354 aaPredicted RBP19.09■□□□□ 0.65
CTSD-203ENST00000429746 SPG21Q9NZD8 308 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 KANSL3Q9P2N6 904 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 CACNG4Q9UBN1 327 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 SEL1LQ9UBV2 794 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 SERTAD1Q9UHV2 236 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 ATP6V1DQ9Y5K8 247 aa19.09■□□□□ 0.65
CTSD-203ENST00000429746 A0A1W2PQ27 194 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 A0A1W2PQ64 194 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 A0A1W2PQD8 194 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 NRP1O14786 923 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 GAP43P17677 238 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 SCP2P22307 547 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 GTF2F1P35269 517 aaKnown RBP eCLIP19.08■□□□□ 0.64
CTSD-203ENST00000429746 HOXD13P35453 343 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 PPM1AP35813 382 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 NDUFA8P51970 172 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 HYAL1Q12794 435 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 COASYQ13057 564 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 LEXMQ3ZCV2 418 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 SEZ6Q53EL9 994 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 ZBTB41Q5SVQ8 909 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 ZBTB33Q86T24 672 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 URGCPQ8TCY9 931 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 ZMAT2Q96NC0 199 aaKnown RBP19.08■□□□□ 0.64
CTSD-203ENST00000429746 PPP1R10Q96QC0 940 aaKnown RBP19.08■□□□□ 0.64
CTSD-203ENST00000429746 ADPGKQ9BRR6 497 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 ZHX3Q9H4I2 956 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 PARP2Q9UGN5 583 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 GDAQ9Y2T3 454 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 STYXL1Q9Y6J8 313 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 VWA8A3KMH1 1905 aa19.08■□□□□ 0.64
CTSD-203ENST00000429746 H0YCG3 227 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 KLRC4O43908 158 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 SLFN14P0C7P3 912 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 MYBP10242 640 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 ADSSP30520 456 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 GRIK3Q13003 919 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 STRN3Q13033 797 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 CUL4BQ13620 913 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 NOLC1Q14978 699 aaKnown RBP eCLIP19.07■□□□□ 0.641e-8■□□□□ 8.1
CTSD-203ENST00000429746 CTC1Q2NKJ3 1217 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 CD300LGQ6UXG3 332 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 EPM2AIP1Q7L775 607 aaPredicted RBP19.07■□□□□ 0.64
CTSD-203ENST00000429746 SNX27Q96L92 541 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 MAGEF1Q9HAY2 307 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 TLR9Q9NR96 1032 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 PANK4Q9NVE7 773 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 TBC1D7Q9P0N9 293 aa19.07■□□□□ 0.64
CTSD-203ENST00000429746 CIZ1Q9ULV3 898 aaPredicted RBP19.07■□□□□ 0.64
CTSD-203ENST00000429746 A0A0B4J269 797 aa19.06■□□□□ 0.64
CTSD-203ENST00000429746 HIDE1A8MVS5 230 aa19.06■□□□□ 0.64
CTSD-203ENST00000429746 CSPG5O95196 566 aa19.06■□□□□ 0.64
CTSD-203ENST00000429746 ADRB2P07550 413 aa19.06■□□□□ 0.64
CTSD-203ENST00000429746 LTBRP36941 435 aa19.06■□□□□ 0.64
CTSD-203ENST00000429746 ALDH7A1P49419 539 aaKnown RBP19.06■□□□□ 0.64
CTSD-203ENST00000429746 RNASELQ05823 741 aaKnown RBP19.06■□□□□ 0.64
CTSD-203ENST00000429746 SOX4Q06945 474 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms