RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RMDN2Q96LZ7 410 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 VPS37BQ9H9H4 285 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 SYNGAP1Q96PV0 1343 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 SLC16A3O15427 465 aaKnown RBP13.34□□□□□ -0.27
CDH3-202ENST00000429102 FOSP01100 380 aaPredicted RBP13.34□□□□□ -0.27
CDH3-202ENST00000429102 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
CDH3-202ENST00000429102 CHRNB2P17787 502 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 RASA3Q14644 834 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 SMAD1Q15797 465 aaKnown RBP13.34□□□□□ -0.27
CDH3-202ENST00000429102 RHOT2Q8IXI1 618 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 KREMEN1Q96MU8 473 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 TEKT3Q9BXF9 490 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 DCTN4Q9UJW0 460 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 ADRB2P07550 413 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 ATF2P15336 505 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 RRM1P23921 792 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 TARSP26639 723 aaKnown RBP13.34□□□□□ -0.27
CDH3-202ENST00000429102 PDE6CP51160 858 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 DAW1Q8N136 415 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 RASA4BC9J798 803 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 RASA4O43374 803 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 RALAP11233 206 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 TNNI1P19237 187 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 CHRNA5P30532 468 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 GCKP35557 465 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 MMP13P45452 471 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 PREPLQ4J6C6 727 aaPredicted RBP13.34□□□□□ -0.27
CDH3-202ENST00000429102 TMEM179Q6ZVK1 233 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 DPH6Q7L8W6 267 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 ERICH1Q86X53 443 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 ANKMY2Q8IV38 441 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 DCAF4Q8WV16 495 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 FAM213AQ9BRX8 229 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 YY1AP1Q9H869 796 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 INTUQ9ULD6 942 aa13.34□□□□□ -0.27
CDH3-202ENST00000429102 FAM187AA6NFU0 413 aa13.33□□□□□ -0.27
CDH3-202ENST00000429102 PPIP5K2O43314 1243 aa13.33□□□□□ -0.27
CDH3-202ENST00000429102 SUN1O94901 812 aa13.33□□□□□ -0.27
CDH3-202ENST00000429102 DHX34Q14147 1143 aaKnown RBP13.33□□□□□ -0.27
CDH3-202ENST00000429102 BORCS6Q96GS4 357 aa13.33□□□□□ -0.27
CDH3-202ENST00000429102 RSRC1Q96IZ7 334 aaKnown RBP13.33□□□□□ -0.27
CDH3-202ENST00000429102 PITPNM3Q9BZ71 974 aa13.33□□□□□ -0.27
CDH3-202ENST00000429102 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.27
CDH3-202ENST00000429102 CTDP1Q9Y5B0 961 aaPredicted RBP13.33□□□□□ -0.27
CDH3-202ENST00000429102 A0A0A6YYK5 440 aaPredicted RBP13.33□□□□□ -0.28
CDH3-202ENST00000429102 NFIBO00712 420 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 PDHA1P08559 390 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 CFHP08603 1231 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 CETPP11597 493 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 DRP2Q13474 957 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 Q4G0T1 1027 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 CRAMP1Q96RY5 1269 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 GLT8D2Q9H1C3 349 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 SAE1Q9UBE0 346 aaPredicted RBP13.33□□□□□ -0.28
CDH3-202ENST00000429102 CCPG1Q9ULG6 757 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 ZNF148Q9UQR1 794 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 CYP3A7-CYP3A51PA0A087WV96 503 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 BTNL10A8MVZ5 291 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 CYP3A7P24462 503 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 OVGP1Q12889 678 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 FITM2Q8N6M3 262 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 SAYSD1Q9NPB0 183 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 ZHX2Q9Y6X8 837 aa13.33□□□□□ -0.28
CDH3-202ENST00000429102 IGLV3-22A0A075B6J6 115 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 PODXLO00592 558 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 SNX3O60493 162 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 RTN2O75298 545 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 AGTP01019 485 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 CYP11B1P15538 503 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 ACOT2P49753 483 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 KCNH7Q9NS40 1196 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 MCM8Q9UJA3 840 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 ENO4A6NNW6 628 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 PSMD10O75832 226 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 INTS8Q75QN2 995 aaKnown RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 SPATA21Q7Z572 469 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 POLR3CQ9BUI4 534 aaPredicted RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 NYAP2Q9P242 653 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 DENND3A2RUS2 1198 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 CES2O00748 559 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 HNRNPDLO14979 420 aaKnown RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 ITGB5P18084 799 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 GSCP56915 257 aaPredicted RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 SEPT7Q16181 437 aaKnown RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 SNRNP35Q16560 246 aaKnown RBP13.32□□□□□ -0.28
CDH3-202ENST00000429102 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 LDHDQ86WU2 507 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 ERP27Q96DN0 273 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 KDM4CQ9H3R0 1056 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
CDH3-202ENST00000429102 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms