RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CFAP157Q5JU67 520 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 FYB2Q5VWT5 728 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 OLFML2BQ68BL8 750 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 UBL4BQ8N7F7 174 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 C12orf50Q8NA57 414 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-206ENST00000428313 RAD54LQ92698 747 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 GPKOWQ92917 476 aaPredicted RBP eCLIP17.14■□□□□ 0.33
C9orf3-206ENST00000428313 PNMA5Q96PV4 448 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 EURLQ9NYK6 297 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 DDX25Q9UHL0 483 aaKnown RBP17.14■□□□□ 0.33
C9orf3-206ENST00000428313 WASF2Q9Y6W5 498 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 hCG_2014768A0A024R1R8 64 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 FOXO6A8MYZ6 492 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 BIRC5O15392 142 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 RNASEH1O60930 286 aaKnown RBP17.14■□□□□ 0.33
C9orf3-206ENST00000428313 TECP42680 631 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 PSMD7P51665 324 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 RASGRF1Q13972 1273 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 KYNUQ16719 465 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 B3GNT6Q6ZMB0 384 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 PHLDB2Q86SQ0 1253 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 GLIS3Q8NEA6 775 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 PIP4K2CQ8TBX8 421 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 NSL1Q96IY1 281 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 HAUS5O94927 633 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 SLC9A1P19634 815 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 FGFR2P21802 821 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 HADHBP55084 474 aaKnown RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 COASYQ13057 564 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 STAT4Q14765 748 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 DUS1LQ6P1R4 473 aaKnown RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 MTDHQ86UE4 582 aaKnown RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 CCDC105Q8IYK2 499 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 VPS52Q8N1B4 723 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 DDX12PQ92771 950 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 SLCO2A1Q92959 643 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 CCDC77Q9BR77 488 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 SLCO1B3Q9NPD5 702 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 BCRP11274 1271 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 CPA3P15088 417 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 ANPEPP15144 967 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 ITIH2P19823 946 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 PON1P27169 355 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 MAP7D3Q8IWC1 876 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 LNX1Q8TBB1 728 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 CDK5RAP3Q96JB5 506 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 SETDB2Q96T68 719 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
C9orf3-206ENST00000428313 COL1A1P02452 1464 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-206ENST00000428313 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 RASA4BC9J798 803 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 PLSCR1O15162 318 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 RASA4O43374 803 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 SERPINB8P50452 374 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 CABP4P57796 275 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 RPL26P61254 145 aaKnown RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 CAV1Q03135 178 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 CDC16Q13042 620 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 THOC5Q13769 683 aaKnown RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 KBTBD12Q3ZCT8 623 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 FAM26FQ5R3K3 315 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 TMEM63BQ5T3F8 832 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 SEL1L2Q5TEA6 688 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 C11orf63Q6NUN7 778 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 DNAJC14Q6Y2X3 702 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 MIGA1Q8NAN2 632 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 OLIG1Q8TAK6 271 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 OXCT2Q9BYC2 517 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 SMG5Q9UPR3 1016 aaKnown RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 ZNF148Q9UQR1 794 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 TP73O15350 636 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 THAP12O43422 761 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 CETPP11597 493 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 CTTNQ14247 550 aaKnown RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 KRT72Q14CN4 511 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 TNIP1Q15025 636 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 SLC44A4Q53GD3 710 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 ZDHHC14Q8IZN3 488 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 NMD3Q96D46 503 aaKnown RBP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 ARL8BQ9NVJ2 186 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 NDE1Q9NXR1 346 aa17.12■□□□□ 0.33
C9orf3-206ENST00000428313 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms