RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MORC4Q8TE76 937 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 ERP27Q96DN0 273 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 AP1M1Q9BXS5 423 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 LRRC27Q9C0I9 530 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 TIMMDC1Q9NPL8 285 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 CCDC87Q9NVE4 849 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 ARMCX3Q9UH62 379 aaPredicted RBP5.5□□□□□ -1.53
RIF1-203ENST00000428287 SMIM22K7EJ46 135 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 ALDH2P05091 517 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 GNA11P29992 359 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 PLTPP55058 493 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 MCL1Q07820 350 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 FAM26FQ5R3K3 315 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 RC3H1Q5TC82 1133 aaKnown RBP5.5□□□□□ -1.53
RIF1-203ENST00000428287 TMEM154Q6P9G4 183 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 STK33Q9BYT3 514 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 VPS11Q9H270 941 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 TAOK3Q9H2K8 898 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 TDRD6O60522 2096 aaKnown RBP5.5□□□□□ -1.53
RIF1-203ENST00000428287 CDK7P50613 346 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 RBM5P52756 815 aaKnown RBP eCLIP5.5□□□□□ -1.532e-8■■■□□ 16.5
RIF1-203ENST00000428287 STRN3Q13033 797 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 NFIL3Q16649 462 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 TMCO4Q5TGY1 634 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 DAAM2Q86T65 1068 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 RAB34Q9BZG1 259 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.5□□□□□ -1.53
RIF1-203ENST00000428287 NFASCO94856 1347 aa5.5□□□□□ -1.53
RIF1-203ENST00000428287 DLDP09622 509 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 FGFR1P11362 822 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 CDR2Q01850 454 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 SLC34A1Q06495 639 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ARMC3Q5W041 872 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 SLC35C1Q96A29 364 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 MKNK1Q9BUB5 465 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 OSGEPQ9NPF4 335 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 CCDC194A0A1B0GVG4 234 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 STAT1P42224 750 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 POLR2FP61218 127 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 MAP3K10Q02779 954 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ACAD11Q709F0 780 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 MIGA2Q7L4E1 593 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 CRYGNQ8WXF5 182 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 SMC6Q96SB8 1091 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 SSU72Q9NP77 194 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 ERVV-1B6SEH8 477 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 DDX3YO15523 660 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 ADAMTS2O95450 1211 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ITGA2BP08514 1039 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 RNASE9P60153 205 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 RPL26P61254 145 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 GRB10Q13322 594 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ANKRD35Q8N283 1001 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 MIPOL1Q8TD10 442 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 DGCR14Q96DF8 476 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 SIX2Q9NPC8 291 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 DDX25Q9UHL0 483 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 CETN3O15182 167 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TGDSO95455 350 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 LMNB1P20700 586 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 CACNA2D1P54289 1103 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 RNASELQ05823 741 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 BTKQ06187 659 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 INF2Q27J81 1249 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 CNPY1Q3B7I2 92 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TMEM259Q4ZIN3 620 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 DUS1LQ6P1R4 473 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 SV2BQ7L1I2 683 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 NEK8Q86SG6 692 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 PNMA1Q8ND90 353 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 UCMAQ8WVF2 138 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 NRG4Q8WWG1 115 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TRIM4Q9C037 500 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 OLFML3Q9NRN5 406 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ZBTB12Q9Y330 459 aaPredicted RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 DENND4CQ5VZ89 1909 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TLDC2A0PJX2 215 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 PMM2O15305 246 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 GAS8O95995 478 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 BPIFB4P59827 614 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 KLF1Q13351 362 aaPredicted RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 BCL2A1Q16548 175 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 CABP7Q86V35 215 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 EPS8L3Q8TE67 593 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 MBOAT7Q96N66 472 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TTC25Q96NG3 672 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TUBB6Q9BUF5 446 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 DNAAF2Q9NVR5 837 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 TRIM33Q9UPN9 1127 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 SMG5Q9UPR3 1016 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 PLXNA3P51805 1871 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 TRAF5O00463 557 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 DNAJC6O75061 913 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 AKAP3O75969 853 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 PDHA1P08559 390 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 PYGBP11216 843 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ITIH2P19823 946 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ACADVLP49748 655 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 EXOC3L4Q17RC7 722 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms