RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SERPINB4P48594 390 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TFDP2Q14188 446 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 EGFLAMQ63HQ2 1017 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 ALKBH2Q6NS38 261 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PPP1R18Q6NYC8 613 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TTC13Q8NBP0 860 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PHC3Q8NDX5 983 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SYMPKQ92797 1274 aaKnown RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 DTNAQ9Y4J8 743 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SAR1BQ9Y6B6 198 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 ATP7AQ04656 1500 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 EEF1DP29692 281 aaKnown RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 HMOX2P30519 316 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 MTX1Q13505 466 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PAN2Q504Q3 1202 aaKnown RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 COBLL1Q53SF7 1204 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 CENPUQ71F23 418 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TMEM35BQ8NCS4 154 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 RAPGEF5Q92565 580 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 ABI2Q9NYB9 513 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 SLC9A2Q9UBY0 812 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 NARFQ9UHQ1 456 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 GPN3Q9UHW5 284 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 FAM47DPA6NHR8 397 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 H0Y626 953 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 GOLGA8RI6L899 631 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PSMD12O00232 456 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 HNRNPCP07910 306 aaKnown RBP eCLIP6.06□□□□□ -1.442e-7■■■■□ 24.4
HERC4-206ENST00000427635 EFNA5P52803 228 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 MAP3K10Q02779 954 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 LRRC24Q50LG9 513 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SP8Q8IXZ3 490 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TADA1Q96BN2 335 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 DHTKD1Q96HY7 919 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 CENPOQ9BU64 300 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SEC31BQ9NQW1 1179 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 STARD7Q9NQZ5 370 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 CUEDC1Q9NWM3 386 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 KLHL3Q9UH77 587 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 NLRP1Q9C000 1473 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 PRAMEF22A3QJZ6 481 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 MAGEB2O15479 319 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 PPP6R2O75170 966 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 AP1G2O75843 785 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 HPGDP15428 266 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 RPS12P25398 132 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 ANXA11P50995 505 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 C21orf59P57076 290 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 APBA1Q02410 837 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 TGM3Q08188 693 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CDH18Q13634 790 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 GNASQ5JWF2 1037 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CDKL3Q8IVW4 592 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 CAMKK1Q8N5S9 505 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 NSUN7Q8NE18 718 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 SNX21Q969T3 373 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 SLITRK1Q96PX8 696 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 HERC5Q9UII4 1024 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 SLC30A1Q9Y6M5 507 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 ANKARQ7Z5J8 1434 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 GOLGA8TH3BQL2 631 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 KPNA6O60684 536 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 GFPT2O94808 682 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 GNRH1P01148 92 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 IMPDH2P12268 514 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 JAK1P23458 1154 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 THPOP40225 353 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CLNS1AP54105 237 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 TPI1P60174 286 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 COPS2P61201 443 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 MTMR2Q13614 643 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 HERC6Q8IVU3 1022 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 SLC7A14Q8TBB6 771 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 USP13Q92995 863 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 FBXO10Q9UK96 956 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CCDC78A2IDD5 438 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 SYCE1LA8MT33 242 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 FYNP06241 537 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 MLNP12872 115 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 GJA8P48165 433 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 HMGCS2P54868 508 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 TAGLNQ01995 201 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 COG2Q14746 738 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 POLD3Q15054 466 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 HSP90AA5PQ58FG0 334 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 SYTL1Q8IYJ3 562 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 PYROXD1Q8WU10 500 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 STAG1Q8WVM7 1258 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 RBM41Q96IZ5 413 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 PLEKHA4Q9H4M7 779 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 HDAC6Q9UBN7 1215 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 FAF1Q9UNN5 650 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 TRIM33Q9UPN9 1127 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CTTNBP2Q8WZ74 1663 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 A0A1B0GUA9 196 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 LINC00854A0A1B0GVQ3 168 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 SCAMP3O14828 347 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 TLR2O60603 784 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms