RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 CATSPER3Q86XQ3 398 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 C1orf131Q8NDD1 294 aaKnown RBP13.95□□□□□ -0.18
SPG11-202ENST00000427534 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 SPDYE5A6NIY4 337 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ALDH1A1P00352 501 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 KLRK1P26718 216 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ROR1Q01973 937 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 GRAMD1BQ3KR37 738 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 SPDYE7PQ495Y7 208 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 TTC23LQ6PF05 361 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 TTC8Q8TAM2 541 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 KCNA2P16389 499 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 B4GALNT2Q8NHY0 566 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 IQANK1A0A1B0GTG1 560 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 TPI1P60174 286 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 KRT76Q01546 638 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 KNOP1Q1ED39 458 aaKnown RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 C9orf131Q5VYM1 1079 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 CEP19Q96LK0 163 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 ADA2Q9NZK5 511 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 COPS2P61201 443 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 PDIA2Q13087 525 aaKnown RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 CYP4A22Q5TCH4 519 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 UNC13DQ70J99 1090 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 SP8Q8IXZ3 490 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 SRRM1Q8IYB3 904 aaKnown RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 ABTB1Q969K4 478 aaPredicted RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 SRBD1Q8N5C6 995 aaKnown RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 APOL5Q9BWW9 433 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 RNF19AQ9NV58 838 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 ASB14A6NK59 587 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 EPHB4P54760 987 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 NUGGCQ68CJ6 796 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 RGS9BPQ6ZS82 235 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 SIX5Q8N196 739 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 SCINQ9Y6U3 715 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 ERCC6L2Q5T890 1561 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 STMN1P16949 149 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 VPS39Q96JC1 886 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 PNMA8BQ9ULN7 279 aaPredicted RBP13.94□□□□□ -0.18
SPG11-202ENST00000427534 DAGLAQ9Y4D2 1042 aa13.94□□□□□ -0.18
SPG11-202ENST00000427534 MEFVO15553 781 aaPredicted RBP13.93□□□□□ -0.18
SPG11-202ENST00000427534 ITGA4P13612 1032 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 COG2Q14746 738 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 ATP8B1O43520 1251 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 ABCD1P33897 745 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 KLHL29Q96CT2 875 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 Q9H521 79 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 SUN2Q9UH99 717 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 JRKLQ9Y4A0 524 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 RASA4BC9J798 803 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 RASA4O43374 803 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 ZRANB2O95218 330 aaKnown RBP eCLIP13.93□□□□□ -0.18
SPG11-202ENST00000427534 GPC5P78333 572 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 GRM4Q14833 912 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 UNC45AQ9H3U1 944 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 MFAP3LO75121 409 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 SEC24DO94855 1032 aaPredicted RBP13.93□□□□□ -0.18
SPG11-202ENST00000427534 VTNP04004 478 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 FOXO4P98177 505 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 SLC7A14Q8TBB6 771 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 DRC3Q9H069 523 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 KPNA2P52292 529 aaKnown RBP13.93□□□□□ -0.18
SPG11-202ENST00000427534 PLIN5Q00G26 463 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 PWP1Q13610 501 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 PARK7Q99497 189 aaKnown RBP13.93□□□□□ -0.18
SPG11-202ENST00000427534 RNF14Q9UBS8 474 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 V9GYQ6 96 aa13.93□□□□□ -0.18
SPG11-202ENST00000427534 FGFR4P22455 802 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 IGFBP4P22692 258 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 RCAN1P53805 252 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 CRLF3Q8IUI8 442 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 MS4A14Q96JA4 679 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPG11-202ENST00000427534 ALX1Q15699 326 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 KRT80Q6KB66 452 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 SARM1Q6SZW1 724 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 POLR3CQ9BUI4 534 aaPredicted RBP13.92□□□□□ -0.18
SPG11-202ENST00000427534 FLT1P17948 1338 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 SETSIPP0DME0 302 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 C10orf120Q5SQS8 335 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 CCHCR1Q8TD31 782 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 MTA3Q9BTC8 594 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 PCDHA10Q9Y5I2 948 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 CHD1O14646 1710 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 PITPNM2Q9BZ72 1349 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms