RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 SLC9A4Q6AI14 798 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 SYCE2Q6PIF2 218 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 MSANTD1Q6ZTZ1 278 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PDZD4Q76G19 769 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PCGF5Q86SE9 256 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 OR8H2Q8N162 312 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DQX1Q8TE96 717 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CCDC74AQ96AQ1 378 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ARHGAP28Q9P2N2 729 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TRIM43BA6NCK2 446 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CDH11P55287 796 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 EXOSC9Q06265 439 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 LPCAT2Q7L5N7 544 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 REXO1Q8N1G1 1221 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 COMMD9Q9P000 198 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ANKIB1Q9P2G1 1089 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ZMYM3Q14202 1370 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ZNF12P17014 697 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 RBM5P52756 815 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PTK7Q13308 1070 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CARTPTQ16568 116 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 LHFPL3Q86UP9 236 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 KCNV2Q8TDN2 545 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 SLF1Q9BQI6 1058 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 APOL6Q9BWW8 343 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DDX56Q9NY93 547 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ZBTB43O43298 467 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 MAPK4P31152 587 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 SULT1E1P49888 294 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DHX34Q14147 1143 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 FAM199XQ6PEV8 388 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 BORCS5Q969J3 196 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 KCTD5Q9NXV2 234 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 SRP72O76094 671 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 RPL13P26373 211 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 MARK3P27448 753 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 FBXO42Q6P3S6 717 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TRPM8Q7Z2W7 1104 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ZNF654Q8IZM8 581 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ANKRD49Q8WVL7 239 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 AASDHPPTQ9NRN7 309 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 HMG20BQ9P0W2 317 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 AMFRQ9UKV5 643 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 A0A0X1KG70 313 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PDPK1O15530 556 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 SUPT7LO94864 414 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 HSF2Q03933 536 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ILF3Q12906 894 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PLEKHO1Q53GL0 409 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ZRANB3Q5FWF4 1079 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TBC1D9BQ66K14 1250 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 MYO1HQ8N1T3 1032 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DRAXINQ8NBI3 349 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 AKAP1Q92667 903 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 NOD2Q9HC29 1040 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DACT1Q9NYF0 836 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 GFPT2O94808 682 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CCT8P50990 548 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CYP4F2P78329 520 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CYP4F3Q08477 520 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DMC1Q14565 340 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 HSD17B12Q53GQ0 312 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 AARS2Q5JTZ9 985 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PPM1LQ5SGD2 360 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TTC22Q5TAA0 569 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 LIN54Q6MZP7 749 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TTC33Q6PID6 262 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 DZIP3Q86Y13 1208 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 KLHL7Q8IXQ5 586 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 MREGQ8N565 214 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 LRRC17Q8N6Y2 441 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 FAM172AQ8WUF8 416 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 EHD4Q9H223 541 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 POLR3BQ9NW08 1133 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 CENPBD1B2RD01 187 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 M0QX08 132 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ARF3P61204 181 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ARF1P84077 181 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 KCNB1Q14721 858 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 COG2Q14746 738 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TCP11L2Q8N4U5 519 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 HELQQ8TDG4 1101 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 C12orf65Q9H3J6 166 aaKnown RBP8.19□□□□□ -1.1
LINC00649-203ENST00000427447 TAS2R1Q9NYW7 299 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 SLC12A4Q9UP95 1085 aa8.19□□□□□ -1.1
LINC00649-203ENST00000427447 ZBED4O75132 1171 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 IFNAR2P48551 515 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 ADALQ6DHV7 355 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 MOB1BQ7L9L4 216 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 ANKRD13CQ8N6S4 541 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 COX4I2Q96KJ9 171 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 FAM118BQ9BPY3 351 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 HSPA12AO43301 675 aa8.18□□□□□ -1.1
LINC00649-203ENST00000427447 PRKAR2AP13861 404 aaKnown RBP8.18□□□□□ -1.1
LINC00649-203ENST00000427447 GNA11P29992 359 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms