RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 GIT1Q9Y2X7 761 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 KLF18A0A0U1RQI7 1052 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 CCDC196A0A1B0GTZ2 297 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 ECI2O75521 394 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 TDGF1P13385 188 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 CCR3P51677 355 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 RCAN1P53805 252 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 PSMC5P62195 406 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 LAMTOR4Q0VGL1 99 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 PCBP1Q15365 356 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDAC6-206ENST00000426196 CSRP2Q16527 193 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 PABPC1LQ4VXU2 614 aaKnown RBP15.82■□□□□ 0.12
HDAC6-206ENST00000426196 IL31Q6EBC2 164 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 RNF149Q8NC42 400 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 CCDC148Q8NFR7 591 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 DNASE1L2Q92874 299 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 TTPALQ9BTX7 342 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 NDRG2Q9UN36 371 aaKnown RBP15.82■□□□□ 0.12
HDAC6-206ENST00000426196 HES2Q9Y543 173 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 LAMA1P25391 3075 aa15.82■□□□□ 0.12
HDAC6-206ENST00000426196 VWA8A3KMH1 1905 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 MAN2B1O00754 1011 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 POU2F2P09086 479 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 PMLP29590 882 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 GRIK3Q13003 919 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 FZD5Q13467 585 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 SIM2Q14190 667 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-206ENST00000426196 NECTIN1Q15223 517 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 PSMD5Q16401 504 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 RTP2Q5QGT7 225 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-206ENST00000426196 SLC7A14Q8TBB6 771 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 TCP11Q8WWU5 503 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 ING5Q8WYH8 240 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 PIK3R5Q8WYR1 880 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 TMEM143Q96AN5 459 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 CEP170P1Q96L14 293 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 TCEANC2Q96MN5 208 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 CSRNP2Q9H175 543 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 MRPS23Q9Y3D9 190 aaKnown RBP15.81■□□□□ 0.12
HDAC6-206ENST00000426196 PPME1Q9Y570 386 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 SPEGQ15772 3267 aa15.81■□□□□ 0.12
HDAC6-206ENST00000426196 ARID2Q68CP9 1835 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 ASAP2O43150 1006 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 TSPAN1O60635 241 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 DKC1O60832 514 aaKnown RBP eCLIP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 RFC5P40937 340 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 NPEPPSP55786 919 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 SHC2P98077 582 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 Q4G0T1 1027 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 B3GNT9Q6UX72 402 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 CEP57Q86XR8 500 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 RABGGTAQ92696 567 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 CPB2Q96IY4 423 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 CLSTN3Q9BQT9 956 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 NXF3Q9H4D5 531 aaKnown RBP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 DHX33Q9H6R0 707 aaKnown RBP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-206ENST00000426196 HCFC1R1Q9NWW0 138 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 GDE1Q9NZC3 331 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 PKD1L2Q7Z442 2459 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 TICRRQ7Z2Z1 1910 aa15.8■□□□□ 0.12
HDAC6-206ENST00000426196 ZMYM2Q9UBW7 1377 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 EDIL3O43854 480 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 GDF9O60383 454 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 QARSP47897 775 aaKnown RBP15.79■□□□□ 0.12
HDAC6-206ENST00000426196 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
HDAC6-206ENST00000426196 UVSSAQ2YD98 709 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 AXDND1Q5T1B0 1012 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-206ENST00000426196 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 DHX32Q7L7V1 743 aaKnown RBP15.79■□□□□ 0.12
HDAC6-206ENST00000426196 FERMT3Q86UX7 667 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 HASPINQ8TF76 798 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 BRD9Q9H8M2 597 aa15.79■□□□□ 0.12
HDAC6-206ENST00000426196 BMP2KQ9NSY1 1161 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-206ENST00000426196 IGF2RP11717 2491 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 INO80B-WBP1J3KQ70 363 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 PRPF3O43395 683 aaKnown RBP15.78■□□□□ 0.12
HDAC6-206ENST00000426196 ELAVL2Q12926 359 aaKnown RBP15.78■□□□□ 0.12
HDAC6-206ENST00000426196 EMC2Q15006 297 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 RTL10Q7L3V2 364 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 GSTCDQ8NEC7 633 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-206ENST00000426196 TBCKQ8TEA7 893 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 ELSPBP1Q96BH3 223 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 MCRS1Q96EZ8 462 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 C22orf23Q9BZE7 217 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 PLA2G2FQ9BZM2 168 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 ANO2Q9NQ90 1003 aa15.78■□□□□ 0.12
HDAC6-206ENST00000426196 DNMT3BQ9UBC3 853 aaKnown RBP15.78■□□□□ 0.12
HDAC6-206ENST00000426196 SHISA7A6NL88 538 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms