RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 TBC1D30Q9Y2I9 924 aa3.42□□□□□ -1.86
R3HDM1-205ENST00000425804 USP15Q9Y4E8 981 aaPredicted RBP3.42□□□□□ -1.86
R3HDM1-205ENST00000425804 PTCH2Q9Y6C5 1203 aa3.42□□□□□ -1.86
R3HDM1-205ENST00000425804 RAPGEF3O95398 923 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 ZBTB48P10074 688 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 BMT2Q1RMZ1 405 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 FAM102AQ5T9C2 384 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 DRICH1Q6PGQ1 229 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 ZDHHC17Q8IUH5 632 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 JMYQ8N9B5 988 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 E2F7Q96AV8 911 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 SARAFQ96BY9 339 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 MAML3Q96JK9 1138 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 CLUHP3Q96NS8 147 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 DNAJC2Q99543 621 aaKnown RBP3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 KANSL2Q9H9L4 492 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 TRIM39Q9HCM9 518 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 CASS4Q9NQ75 786 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 ZKSCAN5Q9Y2L8 839 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 CC2D2AQ9P2K1 1620 aa3.41□□□□□ -1.86
R3HDM1-205ENST00000425804 SLC12A8A0AV02 714 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 DVL2O14641 736 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 EFCAB14O75071 495 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 HIP1RO75146 1068 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 KRT37O76014 449 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 ALDH1A2O94788 518 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 NAT1P18440 290 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 GPD1P21695 349 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 GZMKP49863 264 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 TMEM177Q53S58 311 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 NOP9Q86U38 636 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 TIMP4Q99727 224 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 NCOA5Q9HCD5 579 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 CPNE5Q9HCH3 593 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 INTS7Q9NVH2 962 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 BCCIPQ9P287 314 aaKnown RBP eCLIP3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 BTBD3Q9Y2F9 522 aa3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 TMA7Q9Y2S6 64 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-205ENST00000425804 IGKV2D-30A0A075B6S6 120 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 MARCH6O60337 910 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 GLRX3O76003 335 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 GAAP10253 952 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 RBP3P10745 1247 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 KELP23276 732 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 IRF9Q00978 393 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 ZNF460Q14592 562 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 C2orf27AQ580R0 203 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 METRNLQ641Q3 311 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 SLC9A4Q6AI14 798 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 C2orf69Q8N8R5 385 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 ZSWIM2Q8NEG5 633 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 ARMC5Q96C12 935 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 NEU1Q99519 415 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 AIFM2Q9BRQ8 373 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 OSBPL6Q9BZF3 934 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 SYNPO2Q9UMS6 1093 aa3.39□□□□□ -1.87
R3HDM1-205ENST00000425804 PLEKHD1A6NEE1 506 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 M0R2C6 588 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 PPP1R12AO14974 1030 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 KCNQ2O43526 872 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 CLSTN1O94985 981 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 FSBPO95073 299 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 MGAT1P26572 445 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 MECP2P51608 486 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 SQSTM1Q13501 440 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 BMS1Q14692 1282 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 LLGL1Q15334 1064 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 ZNF260Q3ZCT1 412 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 TAF7LQ5H9L4 462 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 ZC3H12BQ5HYM0 836 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 PRAMEF9Q5VWM5 478 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 KIAA1161Q6NSJ0 714 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 GIMAP6Q6P9H5 292 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 PIK3C3Q8NEB9 887 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 MKL1Q969V6 931 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 FUBP1Q96AE4 644 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 MRPL4Q9BYD3 311 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 MTFR1LQ9H019 292 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 BHMT2Q9H2M3 363 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 ANLNQ9NQW6 1124 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 TBCCD1Q9NVR7 557 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 POGKQ9P215 609 aa3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 EIF4G1Q04637 1599 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-205ENST00000425804 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 CECR2Q9BXF3 1484 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 UBA6A0AVT1 1052 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 DNAJC8O75937 253 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 WT1P19544 449 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 SDSP20132 328 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 PTX3P26022 381 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 BCAR1P56945 870 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 HYAL1Q12794 435 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 MAN2A1Q16706 1144 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 SPDYE7PQ495Y7 208 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 ZCCHC8Q6NZY4 707 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 CC2D1AQ6P1N0 951 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 OTOP1Q7RTM1 612 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 TICAM2Q86XR7 235 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 RNF169Q8NCN4 708 aa3.37□□□□□ -1.87
R3HDM1-205ENST00000425804 RPGRQ92834 1020 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms