RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 GJC1P36383 396 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 SSR1P43307 286 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 KCNJ2P63252 427 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 ACCSLQ4AC99 568 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 DAB2IPQ5VWQ8 1189 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 BTNL9Q6UXG8 535 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 PODNQ7Z5L7 613 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 SLC9A9Q8IVB4 645 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 SEMA4DQ92854 862 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 IDI2Q9BXS1 227 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 TRIM7Q9C029 511 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 UBE4BO95155 1302 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 GSTTP1A0A1W2PQM5 241 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 CLRN2A0PK11 232 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 THAP12O43422 761 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 MAPK4P31152 587 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 CLNS1AP54105 237 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 MFAP3P55082 362 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 HADHBP55084 474 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 FMO1Q01740 532 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 GRIPAP1Q4V328 841 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 C1orf220Q5T0J3 134 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM102BQ5T8I3 360 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 WLSQ5T9L3 541 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 KCTD17Q8N5Z5 321 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 THOC1Q96FV9 657 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 PRMT6Q96LA8 375 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 KIFC3Q9BVG8 833 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 ECT2Q9H8V3 914 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 EHMT1Q9H9B1 1298 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 TOPORSQ9NS56 1045 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 ANAPC7Q9UJX3 599 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 NOCTQ9UK39 431 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 MRPL11Q9Y3B7 192 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 CDK5RAP2Q96SN8 1893 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 NHSQ6T4R5 1651 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 GH1P01241 217 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ADRB2P07550 413 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ALAS1P13196 640 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 BRAFP15056 766 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 CYP11B1P15538 503 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ALDH1B1P30837 517 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 LLGL2Q6P1M3 1020 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 CYFIP1Q7L576 1253 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM71AQ8IYT1 594 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 KLHL29Q96CT2 875 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 STAMBPL1Q96FJ0 436 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 PI4K2AQ9BTU6 479 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ZHX2Q9Y6X8 837 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 WNK3Q9BYP7 1800 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 SUN1O94901 812 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 GZMAP12544 262 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 NPR1P16066 1061 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ITGB5P18084 799 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 STX2P32856 288 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ITGA8P53708 1063 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 MYO1EQ12965 1108 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 SIX1Q15475 284 aaPredicted RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ZFYVE27Q5T4F4 411 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 TRMT10CQ7L0Y3 403 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 CPXCR1Q8N123 301 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 CD101Q93033 1021 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 KCNH7Q9NS40 1196 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 KCND2Q9NZV8 630 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ANAPC5Q9UJX4 755 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 SLC12A4Q9UP95 1085 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 COL24A1Q17RW2 1714 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ECE2O60344 883 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 VIL1P09327 827 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 MPP2Q14168 576 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 NAA25Q14CX7 972 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 PRUNE1Q86TP1 453 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 SRRM1Q8IYB3 904 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 TAS1R2Q8TE23 839 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 MORC4Q8TE76 937 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 MRRFQ96E11 262 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 C9orf72Q96LT7 481 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 MXRA8Q9BRK3 442 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 TMEM109Q9BVC6 243 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 PLVAPQ9BX97 442 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ROPN1BQ9BZX4 212 aaPredicted RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 ROPN1Q9HAT0 212 aaPredicted RBP8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 TCEAL9Q9UHQ7 104 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 GTF3C4Q9UKN8 822 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
SMARCC1-202ENST00000425518 KLRG2A4D1S0 409 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 IGF2BP3O00425 579 aaKnown RBP eCLIP8.04□□□□□ -1.125e-9■■■□□ 15
SMARCC1-202ENST00000425518 P4HBP07237 508 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 PLS3P13797 630 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 ATF2P15336 505 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SCP2P22307 547 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 TRAF1Q13077 416 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SNRNP35Q16560 246 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 DACT2Q5SW24 774 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms