RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SLC38A10Q9HBR0 1119 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 UBIAD1Q9Y5Z9 338 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 GJA3Q9Y6H8 435 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 WDR64B1ANS9 1081 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 DHX15O43143 795 aaKnown RBP13.94□□□□□ -0.18
COL12A1-205ENST00000425443 TMEM253P0C7T8 217 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 SLCO1A2P46721 670 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 MXI1P50539 228 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 PSMC5P62195 406 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 PGM5Q15124 567 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 NIPA1Q7RTP0 329 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 IWS1Q96ST2 819 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 KIFC3Q9BVG8 833 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 PIM2Q9P1W9 311 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 DBR1Q9UK59 544 aaKnown RBP13.94□□□□□ -0.18
COL12A1-205ENST00000425443 TCRBV7S2A1N4TA0A589 114 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 PPFIA2O75334 1257 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 VCAM1P19320 739 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 PEX19P40855 299 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 PTENP60484 403 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 ZRSR2Q15696 482 aaKnown RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 DUPD1Q68J44 220 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 CCDC25Q86WR0 208 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 KIAA1683Q9H0B3 1180 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 TAOK3Q9H2K8 898 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 ADAM7Q9H2U9 754 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 ATP9AO75110 1047 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 RASSF9O75901 435 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 FTLP02792 175 aaPredicted RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 PYGLP06737 847 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 DR1Q01658 176 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 BIRC3Q13489 604 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 UGCGQ16739 394 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 TTC27Q6P3X3 843 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 ARHGEF19Q8IW93 802 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 RPUSD2Q8IZ73 545 aaKnown RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 FBXO25Q8TCJ0 367 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 CABS1Q96KC9 395 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 FMO2Q99518 471 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 SLC40A1Q9NP59 571 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 EXOC7Q9UPT5 735 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 ANKRD63C9JTQ0 380 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 RFX1P22670 979 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 JAK3P52333 1124 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 IFI35P80217 286 aaPredicted RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 DMP1Q13316 513 aaPredicted RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 MYBPC2Q14324 1141 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 AGBL2Q5U5Z8 902 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 LMO3Q8TAP4 145 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 TLCD1Q96CP7 247 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
COL12A1-205ENST00000425443 POP1Q99575 1024 aaKnown RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 TRIM6Q9C030 488 aaPredicted RBP13.93□□□□□ -0.18
COL12A1-205ENST00000425443 RPTORQ8N122 1335 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 EGFRP00533 1210 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 KCNA3P22001 575 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
COL12A1-205ENST00000425443 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
COL12A1-205ENST00000425443 BICD1Q96G01 975 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 PDCD2LQ9BRP1 358 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 RNF146Q9NTX7 359 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 TTC7AQ9ULT0 858 aaPredicted RBP13.92□□□□□ -0.18
COL12A1-205ENST00000425443 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
COL12A1-205ENST00000425443 GOLGA6L10A0A0M3HER8 536 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 ANKRD62A6NC57 917 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 CTNND1O60716 968 aaKnown RBP13.92□□□□□ -0.18
COL12A1-205ENST00000425443 DRD4P21917 467 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 KRT76Q01546 638 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 C2CD6Q53TS8 623 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 ANKRD20A8PQ5CZ79 823 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 RUFY4Q6ZNE9 571 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 FAM228AQ86W67 206 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 ATG4CQ96DT6 458 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 CEP170P1Q96L14 293 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 ERP44Q9BS26 406 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 KMT5AQ9NQR1 393 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 DNAJC17Q9NVM6 304 aaKnown RBP13.92□□□□□ -0.18
COL12A1-205ENST00000425443 HAUS2Q9NVX0 235 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
COL12A1-205ENST00000425443 C5orf60A6NFR6 353 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 KIAA0391O15091 583 aaKnown RBP13.91□□□□□ -0.18
COL12A1-205ENST00000425443 PAEPP09466 180 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
COL12A1-205ENST00000425443 SFNP31947 248 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 PTGIRP43119 386 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 KCNJ1P48048 391 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 SOX10P56693 466 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 MICALCLQ6ZW33 695 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 JAMLQ86YT9 394 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 DEFB129Q9H1M3 183 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 PXMP2Q9NR77 195 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 ALG6Q9Y672 507 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms