RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZFYVE28Q9HCC9 887 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 PTPRJQ12913 1337 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 ANO9A1A5B4 782 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 ABLIM1O14639 778 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 FAM189A1O60320 539 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 TNNI1P19237 187 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 RBM10P98175 930 aaKnown RBP28.65■■■□□ 2.18
LDB1-202ENST00000425280 SEZ6Q53EL9 994 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 ZBTB33Q86T24 672 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 NT5C1BQ96P26 610 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 CNTNAP2Q9UHC6 1331 aa28.64■■■□□ 2.18
LDB1-202ENST00000425280 IRF5Q13568 498 aa28.64■■■□□ 2.18
LDB1-202ENST00000425280 ELF2Q15723 593 aa28.64■■■□□ 2.18
LDB1-202ENST00000425280 CCL14Q16627 93 aa28.64■■■□□ 2.18
LDB1-202ENST00000425280 ERCC6LQ2NKX8 1250 aa28.64■■■□□ 2.18
LDB1-202ENST00000425280 NOX5Q96PH1 765 aa28.64■■■□□ 2.18
LDB1-202ENST00000425280 EFCAB8A8MWE9 144 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 ACKR2O00590 384 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 BUB1O43683 1085 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 TFRCP02786 760 aaKnown RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 C4BPAP04003 597 aaKnown RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 MFAP3P55082 362 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 MBTD1Q05BQ5 628 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 ZACNQ401N2 412 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 U2AF1L4Q8WU68 220 aaKnown RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 ALS2CR12Q96Q35 445 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 TCHPQ9BT92 498 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 MINDY3Q9H8M7 445 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 GNEQ9Y223 722 aaKnown RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 INO80B-WBP1J3KQ70 363 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 ZNF865P0CJ78 1059 aaPredicted RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 MCL1Q07820 350 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 PRPF4BQ13523 1007 aaKnown RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 MTHFD1LQ6UB35 978 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 GLYCTKQ8IVS8 523 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 CCDC102AQ96A19 550 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 CGRRF1Q99675 332 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 NFKBIZQ9BYH8 718 aa28.63■■■□□ 2.17
LDB1-202ENST00000425280 INO80BQ9C086 356 aaPredicted RBP28.63■■■□□ 2.17
LDB1-202ENST00000425280 ZSWIM8A7E2V4 1837 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 ATP8B3O60423 1300 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 DYNC1LI2O43237 492 aaPredicted RBP28.62■■■□□ 2.17
LDB1-202ENST00000425280 SREBF2Q12772 1141 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 CRHR2Q13324 411 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 WHAMMP3Q1A5X7 153 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 TDRD10Q5VZ19 366 aaKnown RBP28.62■■■□□ 2.17
LDB1-202ENST00000425280 TSHZ1Q6ZSZ6 1077 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 DNAAF5Q86Y56 855 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 FAM71AQ8IYT1 594 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 SHC3Q92529 594 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 TATDN2Q93075 761 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 IFT122Q9HBG6 1241 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 GJD2Q9UKL4 321 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 JRKLQ9Y4A0 524 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 MYH10P35580 1976 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 BTNL10A8MVZ5 291 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 CYP2B6P20813 491 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 PROZP22891 400 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 CYP2C19P33261 490 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 TNFSF9P41273 254 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 POU5F1BQ06416 359 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 PPFIA1Q13136 1202 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 ELMO3Q96BJ8 720 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 PI4K2AQ9BTU6 479 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 SAR1BQ9Y6B6 198 aa28.62■■■□□ 2.17
LDB1-202ENST00000425280 B4GALT5O43286 388 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 ZC3H11AO75152 810 aaKnown RBP eCLIP28.61■■■□□ 2.174e-16■■□□□ 14.4
LDB1-202ENST00000425280 GRIK4Q16099 956 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 OLFML2BQ68BL8 750 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 SRGAP1Q7Z6B7 1085 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 BRSK2Q8IWQ3 736 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 CEP112Q8N8E3 955 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 PTPRHQ9HD43 1115 aa28.61■■■□□ 2.17
LDB1-202ENST00000425280 A6NJR5 290 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 OGTO15294 1046 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 IQCF3P0C7M6 154 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 RGS2P41220 211 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 PHKA2P46019 1235 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 NAP1L1P55209 391 aaKnown RBP28.6■■■□□ 2.17
LDB1-202ENST00000425280 MARCH8Q5T0T0 291 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 ATF7IP2Q5U623 682 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 AGPAT1Q99943 283 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 AKT3Q9Y243 479 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 HLA-DRAP01903 254 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 TNFAIP3P21580 790 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 TMOD1P28289 359 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 USP8P40818 1118 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 MPZL3Q6UWV2 235 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 SLC20A1Q8WUM9 679 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 UBXN4Q92575 508 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 ZIC5Q96T25 663 aa28.6■■■□□ 2.17
LDB1-202ENST00000425280 PUF60Q9UHX1 559 aaKnown RBP28.6■■■□□ 2.17
LDB1-202ENST00000425280 ABT1Q9ULW3 272 aaKnown RBP28.6■■■□□ 2.17
LDB1-202ENST00000425280 VNN1O95497 513 aa28.59■■■□□ 2.17
LDB1-202ENST00000425280 IFNLR1Q8IU57 520 aaPredicted RBP28.59■■■□□ 2.17
LDB1-202ENST00000425280 LENG1Q96BZ8 264 aaPredicted RBP28.59■■■□□ 2.17
LDB1-202ENST00000425280 APBA2Q99767 749 aa28.59■■■□□ 2.17
LDB1-202ENST00000425280 INTUQ9ULD6 942 aa28.59■■■□□ 2.17
LDB1-202ENST00000425280 A0A087WZ62 844 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 VTNP04004 478 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms