RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 HIC2Q96JB3 615 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 PSMC3IPQ9P2W1 217 aaPredicted RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 ATP9BO43861 1147 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 NLRP11P59045 1033 aaKnown RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 FAM162AQ96A26 154 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 BBS2Q9BXC9 721 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 KLHL25Q9H0H3 589 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 CNGB3Q9NQW8 809 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 TRIM10Q9UDY6 481 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 EIF4G3O43432 1585 aaKnown RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 CLRN2A0PK11 232 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 APOL1O14791 398 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 KLHL2O95198 593 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 GYS1P13807 737 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 SDC4P31431 198 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 CPA2P48052 419 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 BCAR1P56945 870 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 KYNUQ16719 465 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 ITPRIPL1Q6GPH6 555 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 HDDC2Q7Z4H3 204 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 SLC8A2Q9UPR5 921 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 CDYLQ9Y232 598 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 PZPP20742 1482 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 TARSP26639 723 aaKnown RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 EAPPQ56P03 285 aaPredicted RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 CCDC81Q6ZN84 652 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 KDM4CQ9H3R0 1056 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 RBM12Q9NTZ6 932 aaKnown RBP12.76□□□□□ -0.37
LAMA4-207ENST00000424408 TMEM161AQ9NX61 479 aa12.76□□□□□ -0.37
LAMA4-207ENST00000424408 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 CSPG5O95196 566 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 GPC3P51654 580 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 EIF3EP60228 445 aaKnown RBP12.75□□□□□ -0.37
LAMA4-207ENST00000424408 TTC33Q6PID6 262 aaPredicted RBP12.75□□□□□ -0.37
LAMA4-207ENST00000424408 APLFQ8IW19 511 aaPredicted RBP12.75□□□□□ -0.37
LAMA4-207ENST00000424408 CDHR1Q96JP9 859 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 PCMTD2Q9NV79 361 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 NDFIP2Q9NV92 336 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 BFARQ9NZS9 450 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 TMEM120BA0PK00 339 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 SLC16A4O15374 487 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 LRRC31Q6UY01 552 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 OTUB1Q96FW1 271 aaPredicted RBP12.75□□□□□ -0.37
LAMA4-207ENST00000424408 COQ7Q99807 217 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ZCWPW1Q9H0M4 648 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ATP6V0A4Q9HBG4 840 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 SCN3BQ9NY72 215 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 PFASO15067 1338 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 FAM107AO95990 144 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 NME3Q13232 169 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 VPS50Q96JG6 964 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 TMEM245Q9H330 911 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ZFATQ9P243 1243 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ZNF263O14978 683 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 STRNO43815 780 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 GSNP06396 782 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 TRADDQ15628 312 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 WLSQ5T9L3 541 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 IYDQ6PHW0 289 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 GPR141Q7Z602 305 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 CASP10Q92851 521 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 SGSM3Q96HU1 749 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 HSPBP1Q9NZL4 362 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 SLC9A1P19634 815 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 PRELPP51888 382 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 TRIM25Q14258 630 aaKnown RBP12.75□□□□□ -0.37
LAMA4-207ENST00000424408 RCN1Q15293 331 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ZNF710Q8N1W2 664 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.371e-19■■■■■ 159.7
LAMA4-207ENST00000424408 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 ZNF556Q9HAH1 456 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 PARVAQ9NVD7 372 aa12.75□□□□□ -0.37
LAMA4-207ENST00000424408 TSC22D2O75157 780 aa12.74□□□□□ -0.37
LAMA4-207ENST00000424408 PDAP1Q13442 181 aaKnown RBP12.74□□□□□ -0.37
LAMA4-207ENST00000424408 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
LAMA4-207ENST00000424408 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
LAMA4-207ENST00000424408 RBM15Q96T37 977 aaKnown RBP eCLIP12.74□□□□□ -0.37
LAMA4-207ENST00000424408 DHX35Q9H5Z1 703 aaKnown RBP12.74□□□□□ -0.37
LAMA4-207ENST00000424408 AIPL1Q9NZN9 384 aa12.74□□□□□ -0.37
LAMA4-207ENST00000424408 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms