RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PCDHA3Q9Y5H8 950 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 EIF4E1BA6NMX2 242 aaKnown RBP15.4■□□□□ 0.06
MSH5-206ENST00000423982 RASGRF2O14827 1237 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 TBCAO75347 108 aaKnown RBP15.4■□□□□ 0.06
MSH5-206ENST00000423982 USP2O75604 605 aaPredicted RBP15.4■□□□□ 0.06
MSH5-206ENST00000423982 ACSL3O95573 720 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 GH1P01241 217 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
MSH5-206ENST00000423982 RPA1P27694 616 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 VGLL4Q14135 290 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 MESDQ14696 234 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
MSH5-206ENST00000423982 PHLDB3Q6NSJ2 640 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 CTTNBP2NLQ9P2B4 639 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 STK38LQ9Y2H1 464 aa15.4■□□□□ 0.06
MSH5-206ENST00000423982 IGF2BP3O00425 579 aaKnown RBP eCLIP15.39■□□□□ 0.05
MSH5-206ENST00000423982 SNX3O60493 162 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 PHF2O75151 1096 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 SEPT14Q6ZU15 432 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 SCYL3Q8IZE3 742 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 ANKRD42Q8N9B4 389 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 ECT2Q9H8V3 914 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 FAM187AA6NFU0 413 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 PYGMP11217 842 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 PTPRAP18433 802 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
MSH5-206ENST00000423982 HMGCS2P54868 508 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 DHX34Q14147 1143 aaKnown RBP15.39■□□□□ 0.05
MSH5-206ENST00000423982 CCDC174Q6PII3 467 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 MYCT1Q8N699 235 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 GMCL1P1Q8NEA9 526 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 GDAP1Q8TB36 358 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 DYDC1Q8WWB3 177 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 INTS2Q9H0H0 1204 aaKnown RBP15.39■□□□□ 0.05
MSH5-206ENST00000423982 SMCHD1A6NHR9 2005 aa15.39■□□□□ 0.05
MSH5-206ENST00000423982 PFASO15067 1338 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 CCDC189A1A4V9 331 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
MSH5-206ENST00000423982 CHMP2AO43633 222 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 AGTP01019 485 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 KRT16P08779 473 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 C6orf118Q5T5N4 469 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 ELP3Q9H9T3 547 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 RTN2O75298 545 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 FTLP02792 175 aaPredicted RBP15.38■□□□□ 0.05
MSH5-206ENST00000423982 NQO1P15559 274 aaKnown RBP15.38■□□□□ 0.05
MSH5-206ENST00000423982 COMTP21964 271 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 ANXA13P27216 316 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 PSMC2P35998 433 aaKnown RBP15.38■□□□□ 0.05
MSH5-206ENST00000423982 STAT2P52630 851 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 ADCY2Q08462 1091 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 PPP2R5AQ15172 486 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 BMT2Q1RMZ1 405 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 RINT1Q6NUQ1 792 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 SLFN12Q8IYM2 578 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 PWWP2AQ96N64 755 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 EBF2Q9HAK2 575 aa15.38■□□□□ 0.05
MSH5-206ENST00000423982 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 TISP43B9A030 160 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 MSH4O15457 936 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 DIAPH2O60879 1101 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 GSTA1P08263 222 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 DLG4P78352 724 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
MSH5-206ENST00000423982 MPP2Q14168 576 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 SPDYCQ5MJ68 293 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 NUGGCQ68CJ6 796 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 MAEAQ7L5Y9 396 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 CCDC105Q8IYK2 499 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 KAT5Q92993 513 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 ZNF570Q96NI8 536 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 C15orf41Q9Y2V0 281 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 RABGAP1Q9Y3P9 1069 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 CYP3A7-CYP3A51PA0A087WV96 503 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 TMEM120BA0PK00 339 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 ANKRD62A6NC57 917 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 CYP3A7P24462 503 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 CRYMQ14894 314 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
MSH5-206ENST00000423982 ELMO3Q96BJ8 720 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 HOOK2Q96ED9 719 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 OTUD5Q96G74 571 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 GMCL1Q96IK5 515 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 NAP1L3Q99457 506 aaPredicted RBP15.37■□□□□ 0.05
MSH5-206ENST00000423982 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
MSH5-206ENST00000423982 APEX2Q9UBZ4 518 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 PRR12Q9ULL5 1215 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 PPP2R3BQ9Y5P8 575 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 FRMPD4Q14CM0 1322 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 GTPBP10A4D1E9 387 aaKnown RBP15.37■□□□□ 0.05
MSH5-206ENST00000423982 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 ERICH1Q86X53 443 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 CRYGNQ8WXF5 182 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 ZSWIM1Q9BR11 485 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 CDC42EP4Q9H3Q1 356 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms