RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 ENTPD3O75355 529 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 CCNE2O96020 404 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 ELF3P78545 371 aaPredicted RBP12.64□□□□□ -0.39
ERCC1-204ENST00000423698 BAATQ14032 418 aaPredicted RBP12.64□□□□□ -0.39
ERCC1-204ENST00000423698 SLC15A2Q16348 729 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 C6orf89Q6UWU4 347 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 CCDC105Q8IYK2 499 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 BSNDQ8WZ55 320 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 ZNF653Q96CK0 615 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
ERCC1-204ENST00000423698 BZW2Q9Y6E2 419 aaKnown RBP12.64□□□□□ -0.39
ERCC1-204ENST00000423698 PYGMP11217 842 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 PSMC4P43686 418 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CXCL9Q07325 125 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 LRRC14Q15048 493 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 IFI16Q16666 785 aaKnown RBP12.63□□□□□ -0.39
ERCC1-204ENST00000423698 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CDR2LQ86X02 465 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-204ENST00000423698 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 RFFLQ8WZ73 363 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CAVIN3Q969G5 261 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CEP170P1Q96L14 293 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-204ENST00000423698 TMEM117Q9H0C3 514 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 GABBR1Q9UBS5 961 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 DBR1Q9UK59 544 aaKnown RBP12.63□□□□□ -0.39
ERCC1-204ENST00000423698 LAMA3Q16787 3333 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CLDN3O15551 220 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 PIAS1O75925 651 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CFHP08603 1231 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 MTERF2Q49AM1 385 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
ERCC1-204ENST00000423698 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 TSPAN18Q96SJ8 248 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 ISCUQ9H1K1 167 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 ZNF536O15090 1300 aa12.63□□□□□ -0.39
ERCC1-204ENST00000423698 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 PLSCR1O15162 318 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 ACSL3O95573 720 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 LMNB1P20700 586 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 QARSP47897 775 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 TNIP1Q15025 636 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 CAPRIN2Q6IMN6 1127 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 MOXD1Q6UVY6 613 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 DNAJC14Q6Y2X3 702 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 RINLQ6ZS11 566 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 SEPT14Q6ZU15 432 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 ZBTB45Q96K62 511 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 KREMEN1Q96MU8 473 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 SEPT9Q9UHD8 586 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 ADSSP30520 456 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 IFI35P80217 286 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 FSTL1Q12841 308 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 BIRC3Q13489 604 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 SNRNP35Q16560 246 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 TTC27Q6P3X3 843 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 KLHL23Q8NBE8 558 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 XXYLT1Q8NBI6 393 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 SYTL5Q8TDW5 730 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 PBKQ96KB5 322 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 FMO2Q99518 471 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 SEMA4AQ9H3S1 761 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 RPAP3Q9H6T3 665 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 ATP6V0A4Q9HBG4 840 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 TBK1Q9UHD2 729 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 HERC5Q9UII4 1024 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 DAAM1Q9Y4D1 1078 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 SLC16A3O15427 465 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 P4HBP07237 508 aaKnown RBP12.62□□□□□ -0.39
ERCC1-204ENST00000423698 HMGCS2P54868 508 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 CCDC26Q8TAB7 109 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
ERCC1-204ENST00000423698 BCRP11274 1271 aa12.61□□□□□ -0.39
ERCC1-204ENST00000423698 PRKCIP41743 596 aa12.61□□□□□ -0.39
ERCC1-204ENST00000423698 WNT7BP56706 349 aa12.61□□□□□ -0.39
ERCC1-204ENST00000423698 KCNJ2P63252 427 aa12.61□□□□□ -0.39
ERCC1-204ENST00000423698 GRIK3Q13003 919 aa12.61□□□□□ -0.39
ERCC1-204ENST00000423698 GLE1Q53GS7 698 aaKnown RBP12.61□□□□□ -0.39
ERCC1-204ENST00000423698 KAZNQ674X7 775 aa12.61□□□□□ -0.39
ERCC1-204ENST00000423698 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms