RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LIG1P18858 919 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 RFX1P22670 979 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 CLCN5P51795 746 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 ORC2Q13416 577 aaPredicted RBP17.85■□□□□ 0.45
COL18A1-205ENST00000423214 PRPF4BQ13523 1007 aaKnown RBP17.85■□□□□ 0.45
COL18A1-205ENST00000423214 HSP90AA2PQ14568 343 aaPredicted RBP17.85■□□□□ 0.45
COL18A1-205ENST00000423214 HAUS3Q68CZ6 603 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 SPATA31D4Q6ZUB0 917 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 RABGGTAQ92696 567 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 POLR3CQ9BUI4 534 aaPredicted RBP17.85■□□□□ 0.45
COL18A1-205ENST00000423214 RHOBTB2Q9BYZ6 727 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 GPR62Q9BZJ7 368 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 ZFHX2Q9C0A1 2572 aaPredicted RBP17.85■□□□□ 0.45
COL18A1-205ENST00000423214 WDR6Q9NNW5 1121 aaKnown RBP17.85■□□□□ 0.45
COL18A1-205ENST00000423214 CHST7Q9NS84 486 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 ZDHHC7Q9NXF8 308 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 FNIP2Q9P278 1114 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 PRKCBP05771 671 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 ST3GAL1Q11201 340 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 TUSC3Q13454 348 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 PPP2R5AQ15172 486 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 MAPK6Q16659 721 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 FAM187BQ17R55 369 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 CWF19L1Q69YN2 538 aaKnown RBP17.84■□□□□ 0.45
COL18A1-205ENST00000423214 GET4Q7L5D6 327 aaPredicted RBP17.84■□□□□ 0.45
COL18A1-205ENST00000423214 CCDC83Q8IWF9 413 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 GPR65Q8IYL9 337 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 GSTCDQ8NEC7 633 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 DEPTORQ8TB45 409 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 HASPINQ8TF76 798 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 PDZD7Q9H5P4 517 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
COL18A1-205ENST00000423214 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 TGM5O43548 720 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.44
COL18A1-205ENST00000423214 RECQL4O94761 1208 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 C1RP00736 705 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 RPL17P18621 184 aaKnown RBP17.83■□□□□ 0.44
COL18A1-205ENST00000423214 RPA1P27694 616 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 NAMPTP43490 491 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 ZNF174Q15697 407 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 PADI6Q6TGC4 694 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 SIX5Q8N196 739 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 FZD8Q9H461 694 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 SNTG2Q9NY99 539 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 FAM186AA6NE01 2351 aa17.83■□□□□ 0.44
COL18A1-205ENST00000423214 KIF4AO95239 1232 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 THP07101 528 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 AOC1P19801 751 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 TTC38Q5R3I4 469 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 LIN9Q5TKA1 542 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 CEP57Q86XR8 500 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 BSNDQ8WZ55 320 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 ZNF707Q96C28 371 aaPredicted RBP17.82■□□□□ 0.44
COL18A1-205ENST00000423214 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 PAAF1Q9BRP4 392 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 NT5C3AQ9H0P0 336 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 FOXP1Q9H334 677 aaPredicted RBP17.82■□□□□ 0.44
COL18A1-205ENST00000423214 EPS15L1Q9UBC2 864 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
COL18A1-205ENST00000423214 LIMCH1Q9UPQ0 1083 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 CFAP54Q96N23 3096 aa17.82■□□□□ 0.44
COL18A1-205ENST00000423214 STK25O00506 426 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 NARSO43776 548 aaKnown RBP17.81■□□□□ 0.44
COL18A1-205ENST00000423214 CFHP08603 1231 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 CYP11B2P19099 503 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 MUTP22033 750 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 CCT6AP40227 531 aaKnown RBP17.81■□□□□ 0.44
COL18A1-205ENST00000423214 ELAVL2Q12926 359 aaKnown RBP17.81■□□□□ 0.44
COL18A1-205ENST00000423214 PSMD5Q16401 504 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 DCAF4L1Q3SXM0 396 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 RTP2Q5QGT7 225 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 PRSS55Q6UWB4 352 aaPredicted RBP17.81■□□□□ 0.44
COL18A1-205ENST00000423214 APBB1IPQ7Z5R6 666 aaPredicted RBP17.81■□□□□ 0.44
COL18A1-205ENST00000423214 NOSTRINQ8IVI9 506 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 RSAD2Q8WXG1 361 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 MYADMQ96S97 322 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 RTP3Q9BQQ7 232 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 LLPHQ9BRT6 129 aaKnown RBP17.81■□□□□ 0.44
COL18A1-205ENST00000423214 TTPALQ9BTX7 342 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 PRKD2Q9BZL6 878 aa17.81■□□□□ 0.44
COL18A1-205ENST00000423214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■■■■ 31.9
COL18A1-205ENST00000423214 RIF1Q5UIP0 2472 aaKnown RBP17.8■□□□□ 0.44
COL18A1-205ENST00000423214 VPS13AQ96RL7 3174 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 TTLL13PA6NNM8 815 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 ACKR2O00590 384 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 PTGESO14684 152 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 HMGN5P82970 282 aaKnown RBP17.8■□□□□ 0.44
COL18A1-205ENST00000423214 FAM171A1Q5VUB5 890 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 PDXDC1Q6P996 788 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 PIK3R5Q8WYR1 880 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 KIFAP3Q92845 792 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 NXPE3Q969Y0 559 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 CCDC113Q9H0I3 377 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 GDAQ9Y2T3 454 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 FANCMQ8IYD8 2048 aa17.8■□□□□ 0.44
COL18A1-205ENST00000423214 PROB1E7EW31 1015 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 ZMYND10O75800 440 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms