RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ADPGKQ9BRR6 497 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 CCDC113Q9H0I3 377 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.41■□□□□ 0.86
SREBF1-206ENST00000423161 DOCK6Q96HP0 2047 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 CCDC195A0A1B0GUA6 201 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-206ENST00000423161 ECM1Q16610 540 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 PALB2Q86YC2 1186 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 GLYCTKQ8IVS8 523 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 GPR65Q8IYL9 337 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 C4orf32Q8N8J7 132 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 RIN2Q8WYP3 895 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-206ENST00000423161 IFT74Q96LB3 600 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 PHOX2BQ99453 314 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 PAAF1Q9BRP4 392 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 SNTG2Q9NY99 539 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 LRWD1Q9UFC0 647 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 USP20Q9Y2K6 914 aa20.4■□□□□ 0.86
SREBF1-206ENST00000423161 SF3B1O75533 1304 aaKnown RBP eCLIP20.39■□□□□ 0.853e-6■■■■■ 69.2
SREBF1-206ENST00000423161 CASTOR2A6NHX0 329 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 ACKR2O00590 384 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 PTGESO14684 152 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 TADA2AO75478 443 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 RFPL2O75678 378 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 RECQL4O94761 1208 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 EDN1P05305 212 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 SPATA31D3P0C874 917 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 CREMQ03060 361 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 CYP26C1Q6V0L0 522 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 SPATA31D4Q6ZUB0 917 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 HASPINQ8TF76 798 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 HDAC7Q8WUI4 952 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 KIFC3Q9BVG8 833 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 BHMT2Q9H2M3 363 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 POLD4Q9HCU8 107 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 FNIP2Q9P278 1114 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 CITO14578 2027 aa20.39■□□□□ 0.85
SREBF1-206ENST00000423161 CLUHO75153 1309 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 THP07101 528 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 RPL17P18621 184 aaKnown RBP20.38■□□□□ 0.85
SREBF1-206ENST00000423161 U2AF2P26368 475 aaKnown RBP eCLIP20.38■□□□□ 0.85
SREBF1-206ENST00000423161 EEF1DP3Q658K8 133 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 SNX29Q8TEQ0 813 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 SMG7Q92540 1137 aaKnown RBP20.38■□□□□ 0.85
SREBF1-206ENST00000423161 KIFAP3Q92845 792 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 RHOBTB2Q9BYZ6 727 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 WDR6Q9NNW5 1121 aaKnown RBP20.38■□□□□ 0.85
SREBF1-206ENST00000423161 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
SREBF1-206ENST00000423161 KIAA1024Q9UPX6 916 aa20.38■□□□□ 0.85
SREBF1-206ENST00000423161 TGM5O43548 720 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 N4BP1O75113 896 aaKnown RBP20.37■□□□□ 0.85
SREBF1-206ENST00000423161 KIF4AO95239 1232 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 C1RP00736 705 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 GBP2P32456 591 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-206ENST00000423161 EFNA5P52803 228 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 PTGDRQ13258 359 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 PDIA5Q14554 519 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 DCAF4L1Q3SXM0 396 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 PRSS55Q6UWB4 352 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-206ENST00000423161 STAMQ92783 540 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 RAB34Q9BZG1 259 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 CXCL16Q9H2A7 254 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 MFSD1Q9H3U5 465 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 GDAQ9Y2T3 454 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 PCDHB6Q9Y5E3 794 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 STK24Q9Y6E0 443 aa20.37■□□□□ 0.85
SREBF1-206ENST00000423161 TOB1P50616 345 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-206ENST00000423161 TDGQ13569 410 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 RTP2Q5QGT7 225 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 IGSF22Q8N9C0 903 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 ZNF707Q96C28 371 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-206ENST00000423161 KCNK12Q9HB15 430 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 PIDD1Q9HB75 910 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 FAM86C1Q9NVL1 165 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 ZDHHC7Q9NXF8 308 aa20.36■□□□□ 0.85
SREBF1-206ENST00000423161 NUBP1P53384 320 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 NAB2Q15742 525 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 ATF7IP2Q5U623 682 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 FAM171A1Q5VUB5 890 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 LILRA6Q6PI73 481 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 CEP57Q86XR8 500 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 TMEM105Q8N8V8 129 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 IGSF9Q9P2J2 1179 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 DUSP12Q9UNI6 340 aa20.35■□□□□ 0.85
SREBF1-206ENST00000423161 GALR2O43603 387 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-206ENST00000423161 PAPLNO95428 1278 aa20.34■□□□□ 0.85
SREBF1-206ENST00000423161 ELAVL2Q12926 359 aaKnown RBP20.34■□□□□ 0.85
SREBF1-206ENST00000423161 PSMD5Q16401 504 aa20.34■□□□□ 0.85
SREBF1-206ENST00000423161 NT5DC1Q5TFE4 455 aa20.34■□□□□ 0.85
SREBF1-206ENST00000423161 ASTLQ6HA08 431 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-206ENST00000423161 APBB1IPQ7Z5R6 666 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-206ENST00000423161 PIK3R5Q8WYR1 880 aa20.34■□□□□ 0.85
SREBF1-206ENST00000423161 PRKD2Q9BZL6 878 aa20.34■□□□□ 0.85
SREBF1-206ENST00000423161 IRF2BPLQ9H1B7 796 aa20.34■□□□□ 0.85
SREBF1-206ENST00000423161 PDCD11Q14690 1871 aaKnown RBP20.34■□□□□ 0.85
SREBF1-206ENST00000423161 PHLPP2Q6ZVD8 1323 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms