RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ATG4AQ8WYN0 398 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 ACSL3O95573 720 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 HSPA6P17066 643 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 SCTRP47872 440 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 PPP1R7Q15435 360 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 TRIP13Q15645 432 aaPredicted RBP16.94■□□□□ 0.3
CDH1-202ENST00000422392 XKR9Q5GH70 373 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 FAM160B2Q86V87 743 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 HELQQ8TDG4 1101 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 TAAR1Q96RJ0 339 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 CREB1P16220 341 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 CNGA1P29973 690 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 CDR1P51861 262 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 TNIP1Q15025 636 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 CLUL1Q15846 466 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 PARD3BQ8TEW8 1205 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 CCT6BQ92526 530 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 ART4Q93070 314 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 ZNF341Q9BYN7 854 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 RAVER2Q9HCJ3 691 aaKnown RBP16.93■□□□□ 0.3
CDH1-202ENST00000422392 INTS9Q9NV88 658 aaKnown RBP16.93■□□□□ 0.3
CDH1-202ENST00000422392 RASGRF2O14827 1237 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 TP73O15350 636 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 CYP1A2P05177 515 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 ICAM1P05362 532 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 KRT5P13647 590 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 PTGER2P43116 358 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 MFAP3P55082 362 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 AUHQ13825 339 aaKnown RBP16.93■□□□□ 0.3
CDH1-202ENST00000422392 LRRC14Q15048 493 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 TCEAL1Q15170 157 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 C7orf43Q8WVR3 580 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 HVCN1Q96D96 273 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 HERPUD2Q9BSE4 406 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 MTUS1Q9ULD2 1270 aa16.93■□□□□ 0.3
CDH1-202ENST00000422392 MTA2O94776 668 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 MAPTP10636 758 aaKnown RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 PDE6CP51160 858 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 RWDD2BP57060 319 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 KRT17Q04695 432 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 ALCAMQ13740 583 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CYP1B1Q16678 543 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 KRT39Q6A163 491 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 MGARPQ8TDB4 240 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CENPTQ96BT3 561 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 PWWP2AQ96N64 755 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 FAM118BQ9BPY3 351 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CHST7Q9NS84 486 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 GTF3C4Q9UKN8 822 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 COL2A1P02458 1487 aaPredicted RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 ECEL1O95672 775 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 APBA3O96018 575 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CCNE2O96020 404 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 VIMP08670 466 aaKnown RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 RARGP13631 454 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CHKAP35790 457 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 VPS41P49754 854 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 NCKAP1LP55160 1127 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CDR2Q01850 454 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 ADCY2Q08462 1091 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 DRP2Q13474 957 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 C6orf118Q5T5N4 469 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 LMBRD2Q68DH5 695 aaPredicted RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 ELAC2Q9BQ52 826 aaKnown RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 CDC42EP4Q9H3Q1 356 aaKnown RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 ACTR5Q9H9F9 607 aaPredicted RBP16.92■□□□□ 0.3
CDH1-202ENST00000422392 MLXIPLQ9NP71 852 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 CTNNAL1Q9UBT7 734 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 TBX20Q9UMR3 447 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 USP20Q9Y2K6 914 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
CDH1-202ENST00000422392 DENND3A2RUS2 1198 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 NPTX2P47972 431 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 PLCB4Q15147 1175 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 SGO2Q562F6 1265 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 SWT1Q5T5J6 900 aaKnown RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 ARMC9Q7Z3E5 817 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 TMEM161BQ8NDZ6 487 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 PSPC1Q8WXF1 523 aaKnown RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 PARP2Q9UGN5 583 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 CNOT7Q9UIV1 285 aaKnown RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 PCNTO95613 3336 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 KIAA1217Q5T5P2 1943 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 TESPA1A2RU30 521 aaPredicted RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 GGPS1O95749 300 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 AGTP01019 485 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms