RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 DNAJC21Q5F1R6 531 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 RWDD4Q6NW29 188 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ANKRD23Q86SG2 305 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TBC1D31Q96DN5 1066 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TNIP3Q96KP6 325 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 INPP4AQ96PE3 977 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ABHD10Q9NUJ1 306 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 HYOU1Q9Y4L1 999 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 PCDHB7Q9Y5E2 793 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 NKRFO15226 690 aaKnown RBP eCLIP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ALDH7A1P49419 539 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 CASP4P49662 377 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TUBB4BP68371 445 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 FSCN1Q16658 493 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 FAM110CQ1W6H9 321 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TTI2Q6NXR4 508 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SH3RF1Q7Z6J0 888 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 GLIS3Q8NEA6 775 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 GANCQ8TET4 914 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ATP8B4Q8TF62 1192 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 HSD17B14Q9BPX1 270 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 CBWD1Q9BRT8 395 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TMEM39AQ9NV64 488 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SERPING1P05155 500 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SPATA31C1P0DKV0 1188 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GUCY2CP25092 1073 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SLC26A2P50443 739 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 KIF11P52732 1056 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SLC12A3P55017 1021 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 DRAP1Q14919 205 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 ARL13BQ3SXY8 428 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 PPP1R2P3Q6NXS1 205 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SENP7Q9BQF6 1050 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 MTG1Q9BT17 334 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 C17orf75Q9HAS0 396 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 CCDC88AQ3V6T2 1871 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 ENC1O14682 589 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 PPFIA4O75335 1185 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 STAG3L1P0CL83 205 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GNA15P30679 374 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SSTR3P32745 418 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 ADCY8P40145 1251 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SARNPP82979 210 aaKnown RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 NR1I3Q14994 352 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 CENPPQ6IPU0 288 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 TOGARAM2Q6ZUX3 1019 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SH3TC2Q8TF17 1288 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 YME1L1Q96TA2 773 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 INTS2Q9H0H0 1204 aaKnown RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 CEP72Q9P209 647 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 UBE4BO95155 1302 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 A0A087WZ62 844 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GOLGA6CA6NDK9 693 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GOLGA6BA6NDN3 693 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SLC15A5A6NIM6 579 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 PRRG1O14668 218 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GPR182O15218 404 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 MOCS2O96007 188 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GOLGA6DP0CG33 693 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GHRP10912 638 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 ITIH3Q06033 890 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 MAP2K5Q13163 448 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 SH3D19Q5HYK7 790 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 CAPN12Q6ZSI9 719 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 DNAJB3Q8WWF6 145 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 PPP1R13BQ96KQ4 1090 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 FDXACB1Q9BRP7 624 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-201ENST00000421999 GOLGA6AQ9NYA3 693 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 AKAP11Q9UKA4 1901 aa10.41□□□□□ -0.74
CMSS1-201ENST00000421999 DDX60Q8IY21 1712 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 KIAA0391O15091 583 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 KRT1P04264 644 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 TCP1P17987 556 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 SLC9A1P19634 815 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 PSMA2P25787 234 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 NCOA4Q13772 614 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 CELF3Q5SZQ8 465 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 TTC30AQ86WT1 665 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 SEPT8Q92599 483 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 TXNRD2Q9NNW7 524 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 AGPAT5Q9NUQ2 364 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 CNOT8Q9UFF9 292 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF536O15090 1300 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 KPNA6O60684 536 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 BMP6P22004 513 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 FXR1P51114 621 aaKnown RBP eCLIP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 AP3M2P53677 418 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 SLC12A2P55011 1212 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 NCAPHQ15003 741 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 HSDL1Q3SXM5 330 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 REPS2Q8NFH8 660 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 STMN4Q9H169 189 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 PDE11AQ9HCR9 933 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 VAV3Q9UKW4 847 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms