RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 BMP1P13497 986 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 LTBRP36941 435 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 GRM5P41594 1212 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 BMS1Q14692 1282 aaKnown RBP28.95■■■□□ 2.22
CDK9-202ENST00000421939 DUSP6Q16828 381 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 AXDND1Q5T1B0 1012 aaPredicted RBP28.95■■■□□ 2.22
CDK9-202ENST00000421939 DYMQ7RTS9 669 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 ZBTB33Q86T24 672 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 FAM178BQ8IXR5 827 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 DDX12PQ92771 950 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 CDCA3Q99618 268 aaPredicted RBP28.95■■■□□ 2.22
CDK9-202ENST00000421939 TCHPQ9BT92 498 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 VN1R3Q9BXE9 311 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 MARCH5Q9NX47 278 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 STK39Q9UEW8 545 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 ZDHHC9Q9Y397 364 aa28.95■■■□□ 2.22
CDK9-202ENST00000421939 FSD2A1L4K1 749 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 MYMKA6NI61 221 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 DLL1O00548 723 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 PTGESO14684 152 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 PER2O15055 1255 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 TBX10O75333 385 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 NR1I2O75469 434 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 ME1P48163 572 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 ADAM15Q13444 863 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 SHC4Q6S5L8 630 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 CEP120Q8N960 986 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 ADAMTS19Q8TE59 1207 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 CCDC94Q9BW85 323 aaPredicted RBP28.94■■■□□ 2.22
CDK9-202ENST00000421939 ANKFY1Q9P2R3 1169 aa28.94■■■□□ 2.22
CDK9-202ENST00000421939 HARSP12081 509 aaKnown RBP28.93■■■□□ 2.22
CDK9-202ENST00000421939 NDUFV1P49821 464 aa28.93■■■□□ 2.22
CDK9-202ENST00000421939 DLX2Q07687 328 aaPredicted RBP28.93■■■□□ 2.22
CDK9-202ENST00000421939 NOLC1Q14978 699 aaKnown RBP eCLIP28.93■■■□□ 2.22
CDK9-202ENST00000421939 MRPL43Q8N983 215 aaKnown RBP28.93■■■□□ 2.22
CDK9-202ENST00000421939 BICD1Q96G01 975 aa28.93■■■□□ 2.22
CDK9-202ENST00000421939 FIZ1Q96SL8 496 aa28.93■■■□□ 2.22
CDK9-202ENST00000421939 C2orf71A6NGG8 1288 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 THP07101 528 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 CTSAP10619 480 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 CA8P35219 290 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 TUSC3Q13454 348 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.92■■■□□ 2.22
CDK9-202ENST00000421939 ZBTB45Q96K62 511 aaPredicted RBP28.92■■■□□ 2.22
CDK9-202ENST00000421939 CXCL16Q9H2A7 254 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 TOPORSQ9NS56 1045 aaPredicted RBP28.92■■■□□ 2.22
CDK9-202ENST00000421939 TBX20Q9UMR3 447 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 PCDHA7Q9UN72 937 aa28.92■■■□□ 2.22
CDK9-202ENST00000421939 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.91■■■□□ 2.22
CDK9-202ENST00000421939 GLP2RO95838 553 aa28.91■■■□□ 2.22
CDK9-202ENST00000421939 ABCD1P33897 745 aa28.91■■■□□ 2.22
CDK9-202ENST00000421939 YARSP54577 528 aaKnown RBP28.91■■■□□ 2.22
CDK9-202ENST00000421939 SFR1Q86XK3 245 aa28.91■■■□□ 2.22
CDK9-202ENST00000421939 DNAJC19Q96DA6 116 aa28.91■■■□□ 2.22
CDK9-202ENST00000421939 COLEC11Q9BWP8 271 aa28.91■■■□□ 2.22
CDK9-202ENST00000421939 RCOR1Q9UKL0 485 aa28.91■■■□□ 2.22
CDK9-202ENST00000421939 TCF20Q9UGU0 1960 aaKnown RBP28.9■■■□□ 2.22
CDK9-202ENST00000421939 CLDN3O15551 220 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 CXCL14O95715 111 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 NMT1P30419 496 aaKnown RBP28.9■■■□□ 2.22
CDK9-202ENST00000421939 OSTNP61366 133 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 MCL1Q07820 350 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 E2F4Q16254 413 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 PUS10Q3MIT2 529 aaKnown RBP28.9■■■□□ 2.22
CDK9-202ENST00000421939 PTCRAQ6ISU1 281 aaPredicted RBP28.9■■■□□ 2.22
CDK9-202ENST00000421939 AUTS2Q8WXX7 1259 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 CUEDC2Q9H467 287 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 SEL1LQ9UBV2 794 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 IRAK3Q9Y616 596 aa28.9■■■□□ 2.22
CDK9-202ENST00000421939 CASTOR2A6NHX0 329 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 F8W810 466 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 HNRNPDLO14979 420 aaKnown RBP28.89■■■□□ 2.22
CDK9-202ENST00000421939 PIGRP01833 764 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 GAP43P17677 238 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 LIG4P49917 911 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 KRT85P78386 507 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 GTF2BQ00403 316 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 NAB2Q15742 525 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 GLRA4Q5JXX5 417 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 MAP4K3Q8IVH8 894 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 VN1R2Q8NFZ6 395 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 DHX58Q96C10 678 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 UHRF1Q96T88 793 aaPredicted RBP28.89■■■□□ 2.22
CDK9-202ENST00000421939 HERC2P3Q9BVR0 1158 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 TNMDQ9H2S6 317 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 ST6GALNAC4Q9H4F1 302 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 CACNG4Q9UBN1 327 aa28.89■■■□□ 2.22
CDK9-202ENST00000421939 SOD2P04179 222 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 MATR3P43243 847 aaKnown RBP eCLIP28.88■■■□□ 2.21
CDK9-202ENST00000421939 PTPN14Q15678 1187 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 CLUL1Q15846 466 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 IQUBQ8NA54 791 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 SNX27Q96L92 541 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 ACAP3Q96P50 834 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 PPP1R10Q96QC0 940 aaKnown RBP28.88■■■□□ 2.21
CDK9-202ENST00000421939 CLEC1BQ9P126 229 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 BARX2Q9UMQ3 279 aaPredicted RBP28.88■■■□□ 2.21
CDK9-202ENST00000421939 ATP6V1DQ9Y5K8 247 aa28.88■■■□□ 2.21
CDK9-202ENST00000421939 EFEMP2O95967 443 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 SRGAP2BP0DMP2 458 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms