RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ECM29Q5VYK3 1845 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 HOXC12P31275 282 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 KCNJ6P48051 423 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 LACTBP83111 547 aaPredicted RBP6.28□□□□□ -1.4
SFXN1-202ENST00000421887 AIMP1Q12904 312 aaKnown RBP6.28□□□□□ -1.4
SFXN1-202ENST00000421887 DCTN1Q14203 1278 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 CFAP53Q96M91 514 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 GMLQ99445 158 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 TACO1Q9BSH4 297 aaKnown RBP6.28□□□□□ -1.4
SFXN1-202ENST00000421887 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 DEFB129Q9H1M3 183 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 NUDCQ9Y266 331 aa6.28□□□□□ -1.4
SFXN1-202ENST00000421887 RANBP2P49792 3224 aaKnown RBP6.28□□□□□ -1.4
SFXN1-202ENST00000421887 CCL15-CCL14A0A0B4J2E2 113 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 TBX1O43435 398 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 TFRCP02786 760 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 CCL5P13501 91 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 HSP90B1P14625 803 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 CAPN2P17655 700 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 EIF2S2P20042 333 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 BMP5P22003 454 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 LTBRP36941 435 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 PFKPQ01813 784 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 CCL15Q16663 113 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 LRIT3Q3SXY7 679 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 CC2D1BQ5T0F9 858 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 TDHQ8IZJ6 230 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 KREMEN2Q8NCW0 462 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 PIP4K2CQ8TBX8 421 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 U2AF1L4Q8WU68 220 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 OPTNQ96CV9 577 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 THUMPD2Q9BTF0 503 aaKnown RBP6.27□□□□□ -1.41
SFXN1-202ENST00000421887 PLA2G12BQ9BX93 195 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 TLR9Q9NR96 1032 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 NR2E1Q9Y466 385 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 PPP2R3BQ9Y5P8 575 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 UNC80Q8N2C7 3258 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 ZSWIM8A7E2V4 1837 aa6.27□□□□□ -1.41
SFXN1-202ENST00000421887 TLR2O60603 784 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 IGSF3O75054 1194 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 ITGAVP06756 1048 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 ENO2P09104 434 aaPredicted RBP6.26□□□□□ -1.41
SFXN1-202ENST00000421887 DNAJA1P31689 397 aaKnown RBP6.26□□□□□ -1.41
SFXN1-202ENST00000421887 PLA2G5P39877 138 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 EIF4A1P60842 406 aaKnown RBP6.26□□□□□ -1.41
SFXN1-202ENST00000421887 CNGB1Q14028 1251 aaPredicted RBP6.26□□□□□ -1.41
SFXN1-202ENST00000421887 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 PCSK4Q6UW60 755 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 UBE2Q1Q7Z7E8 422 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 JAM3Q9BX67 310 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 ARHGAP39Q9C0H5 1083 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 SLC6A20Q9NP91 592 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 SLC2A4RGQ9NR83 387 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 RIPOR2Q9Y4F9 1068 aa6.26□□□□□ -1.41
SFXN1-202ENST00000421887 XDHP47989 1333 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 DLG5Q8TDM6 1919 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 LAMA3Q16787 3333 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 SGPL1O95470 568 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 IL18BPO95998 194 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 U2AF1L5P0DN76 240 aaPredicted RBP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 PSMC4P43686 418 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 ZNF143P52747 638 aaPredicted RBP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 RACK1P63244 317 aaKnown RBP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 U2AF1Q01081 240 aaKnown RBP eCLIP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 SF1Q15637 639 aaKnown RBP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 PAN2Q504Q3 1202 aaKnown RBP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 ACBD5Q5T8D3 534 aaPredicted RBP6.25□□□□□ -1.41
SFXN1-202ENST00000421887 STRIP1Q5VSL9 837 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 TTLL5Q6EMB2 1281 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 COPS6Q7L5N1 327 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 NECAB2Q7Z6G3 386 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 GDF15Q99988 308 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 VEZTQ9HBM0 779 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 LRP2BPQ9P2M1 347 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 OTOFQ9HC10 1997 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 ALPK3Q96L96 1907 aa6.25□□□□□ -1.41
SFXN1-202ENST00000421887 MGAMO43451 1857 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 ESYT3A0FGR9 886 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 LTFP02788 710 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 CETPP11597 493 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 FAHP16930 419 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 MSX2P35548 267 aaPredicted RBP6.24□□□□□ -1.41
SFXN1-202ENST00000421887 SOX9P48436 509 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 FOXL1Q12952 345 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 PAK2Q13177 524 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 TNFAIP1Q13829 316 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 CCDC152Q4G0S7 254 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 ZMAT1Q5H9K5 638 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 DACT2Q5SW24 774 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 FAM43AQ8N2R8 423 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 BRI3BPQ8WY22 251 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 PRRX2Q99811 253 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 MXD3Q9BW11 206 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 COA1Q9GZY4 146 aa6.24□□□□□ -1.41
SFXN1-202ENST00000421887 ZMYND8Q9ULU4 1186 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms