RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 PMM2O15305 246 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 AFPP02771 609 aaKnown RBP23.41■■□□□ 1.34
ABCF3-202ENST00000421340 CLTBP09497 229 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 ZSCAN20P17040 1043 aaPredicted RBP23.41■■□□□ 1.34
ABCF3-202ENST00000421340 CD52P31358 61 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 KCNH2Q12809 1159 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 NFX1Q12986 1120 aaKnown RBP23.41■■□□□ 1.34
ABCF3-202ENST00000421340 DSC3Q14574 896 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 MBTPS1Q14703 1052 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 UBXN11Q5T124 520 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 FKBP15Q5T1M5 1219 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 CDR2LQ86X02 465 aaPredicted RBP23.41■■□□□ 1.34
ABCF3-202ENST00000421340 HIPK3Q9H422 1215 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 INTS13Q9NVM9 706 aa23.41■■□□□ 1.34
ABCF3-202ENST00000421340 RBAKQ9NYW8 714 aaPredicted RBP23.41■■□□□ 1.34
ABCF3-202ENST00000421340 CENPFP49454 3210 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 A0A1W2PQC6 194 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 P4HA2O15460 535 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 IL18RAPO95256 599 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 NPTXRO95502 500 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 STAG3L1P0CL83 205 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 HARSP12081 509 aaKnown RBP23.4■■□□□ 1.34
ABCF3-202ENST00000421340 UBXN1Q04323 297 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 ZBTB41Q5SVQ8 909 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 CD302Q8IX05 232 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 THNSL1Q8IYQ7 743 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 TMEM39AQ9NV64 488 aa23.4■■□□□ 1.34
ABCF3-202ENST00000421340 GTPBP10A4D1E9 387 aaKnown RBP23.39■■□□□ 1.33
ABCF3-202ENST00000421340 N4BP1O75113 896 aaKnown RBP23.39■■□□□ 1.33
ABCF3-202ENST00000421340 PBX1P40424 430 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 AP3M2P53677 418 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 PLEKHO2Q8TD55 490 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 ACAP3Q96P50 834 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 ERGIC2Q96RQ1 377 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 TSPAN18Q96SJ8 248 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 CCDC94Q9BW85 323 aaPredicted RBP23.39■■□□□ 1.33
ABCF3-202ENST00000421340 FTHL17Q9BXU8 183 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 EIF2AQ9BY44 585 aaKnown RBP23.39■■□□□ 1.33
ABCF3-202ENST00000421340 OSBPL7Q9BZF2 842 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 TRIM6Q9C030 488 aaPredicted RBP23.39■■□□□ 1.33
ABCF3-202ENST00000421340 RPF1Q9H9Y2 349 aaKnown RBP23.39■■□□□ 1.33
ABCF3-202ENST00000421340 PLEKHA5Q9HAU0 1116 aa23.39■■□□□ 1.33
ABCF3-202ENST00000421340 KIAA0355O15063 1070 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 TEX33O43247 280 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 ZNF623O75123 536 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 SKIP12755 728 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 RFC2P35250 354 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 TNFSF9P41273 254 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 RAB27AP51159 221 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 ENOX2Q16206 610 aaKnown RBP23.38■■□□□ 1.33
ABCF3-202ENST00000421340 DCAF17Q5H9S7 520 aaPredicted RBP23.38■■□□□ 1.33
ABCF3-202ENST00000421340 C1orf220Q5T0J3 134 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 TCERG1LQ5VWI1 586 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 TWF2Q6IBS0 349 aaKnown RBP23.38■■□□□ 1.33
ABCF3-202ENST00000421340 APBB2Q92870 758 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 PDLIM2Q96JY6 352 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 FNBP1Q96RU3 617 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 TMX1Q9H3N1 280 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 ASB7Q9H672 318 aa23.38■■□□□ 1.33
ABCF3-202ENST00000421340 LRRIQ3A6PVS8 624 aaPredicted RBP23.37■■□□□ 1.33
ABCF3-202ENST00000421340 CXCL10P02778 98 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 DLG4P78352 724 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 GPNMBQ14956 572 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 SEZ6Q53EL9 994 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 PLEKHG4Q58EX7 1191 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 MRPL10Q7Z7H8 261 aaKnown RBP23.37■■□□□ 1.33
ABCF3-202ENST00000421340 VSTM4Q8IW00 320 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 HACE1Q8IYU2 909 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 CEP120Q8N960 986 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 CCDC127Q96BQ5 260 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 CGRRF1Q99675 332 aa23.37■■□□□ 1.33
ABCF3-202ENST00000421340 IFIH1Q9BYX4 1025 aaKnown RBP23.37■■□□□ 1.33
ABCF3-202ENST00000421340 PES1O00541 588 aaKnown RBP23.36■■□□□ 1.33
ABCF3-202ENST00000421340 NBNO60934 754 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 FMO5P49326 533 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 NT5DC4Q86YG4 428 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 WDR49Q8IV35 697 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 SMG8Q8ND04 991 aaKnown RBP23.36■■□□□ 1.33
ABCF3-202ENST00000421340 TMEM8AQ9HCN3 771 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 PDE11AQ9HCR9 933 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 RGS18Q9NS28 235 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 FAM105AQ9NUU6 356 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 IPPQ9Y573 584 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 PCDHB2Q9Y5E7 798 aa23.36■■□□□ 1.33
ABCF3-202ENST00000421340 ITIH6Q6UXX5 1313 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 A0A0U1RQF3 1178 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 TTC26A0AVF1 554 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 TRIM49P0CI25 452 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 TRIM49CP0CI26 452 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 YARSP54577 528 aaKnown RBP23.35■■□□□ 1.33
ABCF3-202ENST00000421340 OSTNP61366 133 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 PPP3CAQ08209 521 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 CETN1Q12798 172 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 SLC10A6Q3KNW5 377 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 TMEM192Q8IY95 271 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 SEPT8Q92599 483 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 IQCDQ96DY2 449 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 WNT8AQ9H1J5 351 aa23.35■■□□□ 1.33
ABCF3-202ENST00000421340 TOPORSQ9NS56 1045 aaPredicted RBP23.35■■□□□ 1.33
ABCF3-202ENST00000421340 DERAQ9Y315 318 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms