RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.88■□□□□ 0.93
VARS2-202ENST00000421263 LRWD1Q9UFC0 647 aa20.88■□□□□ 0.93
VARS2-202ENST00000421263 NOL7Q9UMY1 257 aaKnown RBP20.88■□□□□ 0.93
VARS2-202ENST00000421263 PLXNA3P51805 1871 aa20.88■□□□□ 0.93
VARS2-202ENST00000421263 CCDC195A0A1B0GUA6 201 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 PRKCBP05771 671 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 CCT6AP40227 531 aaKnown RBP20.87■□□□□ 0.93
VARS2-202ENST00000421263 NUBP1P53384 320 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 NBR1Q14596 966 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 PPP2R5AQ15172 486 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 RABGGTAQ92696 567 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 B3GALT6Q96L58 329 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 BHMT2Q9H2M3 363 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 PLEKHA4Q9H4M7 779 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 SNTG2Q9NY99 539 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 USP20Q9Y2K6 914 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 STK24Q9Y6E0 443 aa20.87■□□□□ 0.93
VARS2-202ENST00000421263 MTCL1Q9Y4B5 1905 aaKnown RBP20.86■□□□□ 0.93
VARS2-202ENST00000421263 SPDYE4A6NLX3 237 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 TGM5O43548 720 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 EFNA5P52803 228 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 PTGDRQ13258 359 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 GNL2Q13823 731 aaKnown RBP20.86■□□□□ 0.93
VARS2-202ENST00000421263 HSP90AA2PQ14568 343 aaPredicted RBP20.86■□□□□ 0.93
VARS2-202ENST00000421263 EEF1DP3Q658K8 133 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 DEPTORQ8TB45 409 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 KIFAP3Q92845 792 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 ZNF707Q96C28 371 aaPredicted RBP20.86■□□□□ 0.93
VARS2-202ENST00000421263 CXCL16Q9H2A7 254 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 POLD4Q9HCU8 107 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 WDR6Q9NNW5 1121 aaKnown RBP20.86■□□□□ 0.93
VARS2-202ENST00000421263 CACNG4Q9UBN1 327 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 KIAA1024Q9UPX6 916 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 PCDHB6Q9Y5E3 794 aa20.86■□□□□ 0.93
VARS2-202ENST00000421263 N4BP1O75113 896 aaKnown RBP20.85■□□□□ 0.93
VARS2-202ENST00000421263 TADA2AO75478 443 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 THP07101 528 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 ELMSAN1Q6PJG2 1045 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 PALB2Q86YC2 1186 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 RIN2Q8WYP3 895 aaPredicted RBP20.85■□□□□ 0.93
VARS2-202ENST00000421263 IFT74Q96LB3 600 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 PHOX2BQ99453 314 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 ADPGKQ9BRR6 497 aa20.85■□□□□ 0.93
VARS2-202ENST00000421263 RFPL2O75678 378 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 RECQL4O94761 1208 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 SPATA31D3P0C874 917 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 CREMQ03060 361 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 RTP2Q5QGT7 225 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 NT5DC1Q5TFE4 455 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 SPATA31D4Q6ZUB0 917 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 NT5C3AQ9H0P0 336 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 KCNK12Q9HB15 430 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 DDX19AQ9NUU7 478 aaKnown RBP20.84■□□□□ 0.93
VARS2-202ENST00000421263 ZDHHC7Q9NXF8 308 aa20.84■□□□□ 0.93
VARS2-202ENST00000421263 SF3B1O75533 1304 aaKnown RBP eCLIP20.83■□□□□ 0.93
VARS2-202ENST00000421263 CASTOR2A6NHX0 329 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 LAD1O00515 517 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 PRPHP41219 470 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 TDGQ13569 410 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 IL17AQ16552 155 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 DCAF4L1Q3SXM0 396 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 LNX1Q8TBB1 728 aaPredicted RBP20.83■□□□□ 0.93
VARS2-202ENST00000421263 KIFC3Q9BVG8 833 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 RAB34Q9BZG1 259 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.83■□□□□ 0.93
VARS2-202ENST00000421263 IGSF9Q9P2J2 1179 aa20.83■□□□□ 0.93
VARS2-202ENST00000421263 KIF4AO95239 1232 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 MYBP10242 640 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 RPL17P18621 184 aaKnown RBP20.82■□□□□ 0.92
VARS2-202ENST00000421263 LIG1P18858 919 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 TMEM132AQ24JP5 1023 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 PRSS55Q6UWB4 352 aaPredicted RBP20.82■□□□□ 0.92
VARS2-202ENST00000421263 DAW1Q8N136 415 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 TMEM105Q8N8V8 129 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 SNX29Q8TEQ0 813 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 PIK3R5Q8WYR1 880 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 SMG7Q92540 1137 aaKnown RBP20.82■□□□□ 0.92
VARS2-202ENST00000421263 CLSTN3Q9BQT9 956 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 TTPALQ9BTX7 342 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 PRKD2Q9BZL6 878 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 IRF2BPLQ9H1B7 796 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 EPS15L1Q9UBC2 864 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 DNM3Q9UQ16 869 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 TNFSF13BQ9Y275 285 aa20.82■□□□□ 0.92
VARS2-202ENST00000421263 CLUHO75153 1309 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 E9PMD0 336 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 K7ERI5 159 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 CLCN5P51795 746 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 ELAVL2Q12926 359 aaKnown RBP20.81■□□□□ 0.92
VARS2-202ENST00000421263 ATF7IP2Q5U623 682 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 HASPINQ8TF76 798 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 STAMQ92783 540 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 MMTAG2Q9BU76 263 aaKnown RBP20.81■□□□□ 0.92
VARS2-202ENST00000421263 TMEM134Q9H6X4 195 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 PTPRHQ9HD43 1115 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 DUSP12Q9UNI6 340 aa20.81■□□□□ 0.92
VARS2-202ENST00000421263 PP2D1A8MPX8 630 aa20.8■□□□□ 0.92
VARS2-202ENST00000421263 GALR2O43603 387 aaPredicted RBP20.8■□□□□ 0.92
VARS2-202ENST00000421263 ZMYND10O75800 440 aa20.8■□□□□ 0.92
VARS2-202ENST00000421263 NPTX2P47972 431 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms