RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 CCDC149Q6ZUS6 474 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 UBALD2Q8IYN6 164 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 ZDHHC14Q8IZN3 488 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 ASIC4Q96FT7 647 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 B3GALT6Q96L58 329 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.66■□□□□ 0.26
RARA-205ENST00000420042 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.66■□□□□ 0.26
RARA-205ENST00000420042 LIMD1Q9UGP4 676 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 USP20Q9Y2K6 914 aa16.66■□□□□ 0.26
RARA-205ENST00000420042 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 RECQL4O94761 1208 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 CREMQ03060 361 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 ATF7IP2Q5U623 682 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 OTOP3Q7RTS5 596 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 PALB2Q86YC2 1186 aa16.65■□□□□ 0.26
RARA-205ENST00000420042 RIN2Q8WYP3 895 aaPredicted RBP16.65■□□□□ 0.26
RARA-205ENST00000420042 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
RARA-205ENST00000420042 CASTOR2A6NHX0 329 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 SPATA31D3P0C874 917 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 MYBP10242 640 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 GJB2P29033 226 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 CDC25AP30304 524 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 PEX3P56589 373 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 DMP1Q13316 513 aaPredicted RBP16.64■□□□□ 0.25
RARA-205ENST00000420042 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
RARA-205ENST00000420042 IL17AQ16552 155 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 EEF1DP3Q658K8 133 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 CYP26C1Q6V0L0 522 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 SPATA31D4Q6ZUB0 917 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 GPR65Q8IYL9 337 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 CMASQ8NFW8 434 aaPredicted RBP16.64■□□□□ 0.25
RARA-205ENST00000420042 FEZF2Q8TBJ5 459 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 HDAC7Q8WUI4 952 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 PRRX2Q99811 253 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 FNIP2Q9P278 1114 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 CACNG4Q9UBN1 327 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 GDAQ9Y2T3 454 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 TECTAO75443 2155 aa16.64■□□□□ 0.25
RARA-205ENST00000420042 PTGESO14684 152 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 HIP1RO75146 1068 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 BRD1O95696 1058 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 C1RP00736 705 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 EDN1P05305 212 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 ASGR2P07307 311 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 MCM2P49736 904 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 NHLH1Q02575 133 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 GLYCTKQ8IVS8 523 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 HASPINQ8TF76 798 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 STAMQ92783 540 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 PAAF1Q9BRP4 392 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 PLEKHA4Q9H4M7 779 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 PIDD1Q9HB75 910 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 TNFSF13BQ9Y275 285 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 C5orf42Q9H799 3197 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 PHLPP2Q6ZVD8 1323 aa16.63■□□□□ 0.25
RARA-205ENST00000420042 TGM5O43548 720 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 KIF4AO95239 1232 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 NPTX2P47972 431 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 YARSP54577 528 aaKnown RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 ATP2C1P98194 919 aaPredicted RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 ALYREFQ86V81 257 aaKnown RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 MRPL4Q9BYD3 311 aaKnown RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 KMT5AQ9NQR1 393 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
RARA-205ENST00000420042 RBM19Q9Y4C8 960 aaKnown RBP16.62■□□□□ 0.25
RARA-205ENST00000420042 TDRD15B5MCY1 1934 aaKnown RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 RFPL2O75678 378 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 AVPR2P30518 371 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 IER5LQ5T953 404 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 C1orf186Q6ZWK4 172 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 KCTD17Q8N5Z5 321 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 MMTAG2Q9BU76 263 aaKnown RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 RUSC1Q9BVN2 902 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 TIPINQ9BVW5 301 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 RHOBTB2Q9BYZ6 727 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 CXCL16Q9H2A7 254 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 TMEM134Q9H6X4 195 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 C17orf75Q9HAS0 396 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 WDR6Q9NNW5 1121 aaKnown RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 KCNG1Q9UIX4 513 aa16.61■□□□□ 0.25
RARA-205ENST00000420042 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.61■□□□□ 0.25
RARA-205ENST00000420042 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms