RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ANKRD1Q15327 319 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 CEP55Q53EZ4 464 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 PRRT3Q5FWE3 981 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 MCTP2Q6DN12 878 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 CPLX2Q6PUV4 134 aaKnown RBP7.86□□□□□ -1.15
HMGN1-205ENST00000419378 C16orf59Q7L2K0 433 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 CYP2W1Q8TAV3 490 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 CRYGNQ8WXF5 182 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 SCLYQ96I15 445 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 RNPC3Q96LT9 517 aaKnown RBP7.86□□□□□ -1.15
HMGN1-205ENST00000419378 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.86□□□□□ -1.154e-7■■■□□ 15.1
HMGN1-205ENST00000419378 LRRC3Q9BY71 257 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 SLKQ9H2G2 1235 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-205ENST00000419378 IL23AQ9NPF7 189 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 KCNH7Q9NS40 1196 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 STK36Q9NRP7 1315 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 MEIS1O00470 390 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 MAFGO15525 162 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 CDKL5O76039 1030 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 LARGE1O95461 756 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 ARP10275 920 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 TCF7P36402 384 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 NASPP49321 788 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 NEK4P51957 841 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 RPL6Q02878 288 aaKnown RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 BFSP2Q13515 415 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 MPP2Q14168 576 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 GRIK4Q16099 956 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 TMEM240Q5SV17 173 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 UTP14CQ5TAP6 766 aaKnown RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 PSRC1Q6PGN9 363 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 IGF2-ASQ6U949 168 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 SHISA2Q6UWI4 295 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 ACAD11Q709F0 780 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 SLITRK4Q8IW52 837 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 BICD2Q8TD16 824 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 DHX38Q92620 1227 aaKnown RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 GTF3C6Q969F1 213 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 SEC16BQ96JE7 1060 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 SPATA32Q96LK8 384 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 AIFM3Q96NN9 605 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 RUSC1Q9BVN2 902 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 AGO4Q9HCK5 861 aaKnown RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 SH3GLB2Q9NR46 395 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 NOP53Q9NZM5 478 aaKnown RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 ZNF215Q9UL58 517 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-205ENST00000419378 SCN5AQ14524 2016 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 CHD9Q3L8U1 2897 aa7.85□□□□□ -1.15
HMGN1-205ENST00000419378 CHD7Q9P2D1 2997 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 NFASCO94856 1347 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 IGLV3-22A0A075B6J6 115 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 GSTTP1A0A1W2PQM5 241 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 C17orf102A2RUQ5 167 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 FAM86B1E9PN63 330 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 CTDNEP1O95476 244 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 PFKMP08237 780 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 CYP3A4P08684 503 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 FAM86B2P0C5J1 330 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SMIM10L2AP0DMW4 78 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SMIM10L2BP0DMW5 78 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 HOXC8P31273 242 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 NLRP5P59047 1200 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 ZNF200P98182 395 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 INSM1Q01101 510 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SETQ01105 290 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 RBL2Q08999 1139 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 ITGB3BPQ13352 177 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 INPP5AQ14642 412 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 ME3Q16798 604 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 TRIM71Q2Q1W2 868 aaKnown RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 WIPI1Q5MNZ9 446 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 EXOSC6Q5RKV6 272 aaKnown RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 HP1BP3Q5SSJ5 553 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 LRFN4Q6PJG9 635 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 ZNF365Q70YC5 407 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 NIPA1Q7RTP0 329 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 REC114Q7Z4M0 266 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SERINC5Q86VE9 423 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 FAM177A1Q8N128 213 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-205ENST00000419378 NECAB1Q8N987 351 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 CAGE1Q8TC20 777 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 AFAP1L1Q8TED9 768 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SEPT1Q8WYJ6 367 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 VWCEQ96DN2 955 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 PLPPR2Q96GM1 343 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SDF4Q9BRK5 362 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 BRMS1Q9HCU9 246 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 RAD18Q9NS91 495 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 SLC9A2Q9UBY0 812 aa7.84□□□□□ -1.15
HMGN1-205ENST00000419378 EMSYQ7Z589 1322 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 TRIP12Q14669 1992 aaPredicted RBP7.83□□□□□ -1.16
HMGN1-205ENST00000419378 DDX39AO00148 427 aaKnown RBP7.83□□□□□ -1.16
HMGN1-205ENST00000419378 DTNBO60941 627 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 FGBP02675 491 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 IQCF3P0C7M6 154 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 CKBP12277 381 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 CIITAP33076 1130 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 MCM4P33991 863 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 RFC2P35250 354 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms