RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SPTLC2O15270 562 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 YEATS4O95619 227 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 IL9P15248 144 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 RBM10P98175 930 aaKnown RBP22.3■■□□□ 1.16
GTF3A-202ENST00000419181 STRN3Q13033 797 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 BMS1Q14692 1282 aaKnown RBP22.3■■□□□ 1.16
GTF3A-202ENST00000419181 RRAGBQ5VZM2 374 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 CXCL16Q9H2A7 254 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 PARVGQ9HBI0 331 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 BARX2Q9UMQ3 279 aaPredicted RBP22.3■■□□□ 1.16
GTF3A-202ENST00000419181 GDAQ9Y2T3 454 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 TRIP11Q15643 1979 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 H0YCG3 227 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 PPP6R2O75170 966 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 NR1I2O75469 434 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 FAM13AO94988 1023 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 BRD1O95696 1058 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 CXCL14O95715 111 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 EFEMP2O95967 443 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 KRT18P05783 430 aaKnown RBP22.29■■□□□ 1.16
GTF3A-202ENST00000419181 CLUL1Q15846 466 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 TMEM184AQ6ZMB5 413 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 HAUS6Q7Z4H7 955 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 CEP120Q8N960 986 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 AUTS2Q8WXX7 1259 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 CD207Q9UJ71 328 aa22.29■■□□□ 1.16
GTF3A-202ENST00000419181 A0A087X0B3 334 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.28■■□□□ 1.16
GTF3A-202ENST00000419181 F8W810 466 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 TBCAO75347 108 aaKnown RBP22.28■■□□□ 1.16
GTF3A-202ENST00000419181 MCF2P10911 925 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 GRM5P41594 1212 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 COASYQ13057 564 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 TUSC3Q13454 348 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 SMAD4Q13485 552 aaKnown RBP22.28■■□□□ 1.16
GTF3A-202ENST00000419181 PTPN14Q15678 1187 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 NAB2Q15742 525 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 MPZL3Q6UWV2 235 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 ZPBP2Q6X784 338 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 CCDC73Q6ZRK6 1079 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 RNF168Q8IYW5 571 aaPredicted RBP22.28■■□□□ 1.16
GTF3A-202ENST00000419181 MYCT1Q8N699 235 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 SMRP1Q8NCR6 262 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 FAM50BQ9Y247 325 aa22.28■■□□□ 1.16
GTF3A-202ENST00000419181 CITO14578 2027 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 MBTPS2O43462 519 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 TRAK2O60296 914 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 TOM1L1O75674 476 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 SOD2P04179 222 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 THP07101 528 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 SCP2P22307 547 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 FOXD4L6Q3SYB3 417 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-202ENST00000419181 FOXD4L3Q6VB84 417 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-202ENST00000419181 ZBTB33Q86T24 672 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 FAM178BQ8IXR5 827 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 FIZ1Q96SL8 496 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 TCHPQ9BT92 498 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 COLEC11Q9BWP8 271 aa22.27■■□□□ 1.16
GTF3A-202ENST00000419181 C5orf42Q9H799 3197 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 K7ENM7 598 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 CLASP2O75122 1294 aaKnown RBP22.26■■□□□ 1.15
GTF3A-202ENST00000419181 CA8P35219 290 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 SMAD2Q15796 467 aaKnown RBP22.26■■□□□ 1.15
GTF3A-202ENST00000419181 ATL3Q6DD88 541 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 SV2BQ7L1I2 683 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 ZBTB45Q96K62 511 aaPredicted RBP22.26■■□□□ 1.15
GTF3A-202ENST00000419181 PAAF1Q9BRP4 392 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 HERC2P3Q9BVR0 1158 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 CCDC94Q9BW85 323 aaPredicted RBP22.26■■□□□ 1.15
GTF3A-202ENST00000419181 ZHX3Q9H4I2 956 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 CACNG4Q9UBN1 327 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 TBX20Q9UMR3 447 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 HCFC2Q9Y5Z7 792 aa22.26■■□□□ 1.15
GTF3A-202ENST00000419181 MYMKA6NI61 221 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 LILRB3O75022 631 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 SRGAP2BP0DMP2 458 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 STAT6P42226 847 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 NOLC1Q14978 699 aaKnown RBP eCLIP22.25■■□□□ 1.15
GTF3A-202ENST00000419181 XKR4Q5GH76 650 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 LLGL2Q6P1M3 1020 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 ALKAL1Q6UXT8 129 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 RABGGTAQ92696 567 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 DDX12PQ92771 950 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 PPP1R10Q96QC0 940 aaKnown RBP22.25■■□□□ 1.15
GTF3A-202ENST00000419181 PANK2Q9BZ23 570 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 TOPORSQ9NS56 1045 aaPredicted RBP22.25■■□□□ 1.15
GTF3A-202ENST00000419181 ANKFY1Q9P2R3 1169 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 ADAM28Q9UKQ2 775 aa22.25■■□□□ 1.15
GTF3A-202ENST00000419181 CASTOR2A6NHX0 329 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 CUTAO60888 179 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 PIGRP01833 764 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 YARSP54577 528 aaKnown RBP22.24■■□□□ 1.15
GTF3A-202ENST00000419181 OSTNP61366 133 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 MCL1Q07820 350 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 HSP90AA2PQ14568 343 aaPredicted RBP22.24■■□□□ 1.15
GTF3A-202ENST00000419181 GLRA4Q5JXX5 417 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 AXDND1Q5T1B0 1012 aaPredicted RBP22.24■■□□□ 1.15
GTF3A-202ENST00000419181 DYMQ7RTS9 669 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 TAS1R1Q7RTX1 841 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 PDILTQ8N807 584 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms