RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 PLAAQ9Y263 795 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
PTCH1-205ENST00000418258 PRKCBP05771 671 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 MGAT5BQ3V5L5 792 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 SMARCAD1Q9H4L7 1026 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
PTCH1-205ENST00000418258 MIF4GDA9UHW6 222 aaKnown RBP11.86□□□□□ -0.51
PTCH1-205ENST00000418258 PDGFRBP09619 1106 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 TWF1Q12792 350 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 PID1Q7Z2X4 250 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 BTBD6Q96KE9 485 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 SPAG7O75391 227 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 RPS6KA5O75582 802 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 RESTQ13127 1097 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 TRIML2Q8N7C3 387 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 DNAJC7Q99615 494 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 KCNN4O15554 427 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 KCNA2P16389 499 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 PDCLQ13371 301 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-205ENST00000418258 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-205ENST00000418258 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 CCDC90BQ9GZT6 254 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 SNX24Q9Y343 169 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 SCARF1Q14162 830 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 ZFYVE19Q96K21 471 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 ABHD10Q9NUJ1 306 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 LRRC53A6NM62 1247 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 CCDC188H7C350 402 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
PTCH1-205ENST00000418258 KRT72Q14CN4 511 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 ANGEL2Q5VTE6 544 aaKnown RBP11.85□□□□□ -0.51
PTCH1-205ENST00000418258 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 AGAP3Q96P47 875 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 BFARQ9NZS9 450 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 AP3M2P53677 418 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 SNX17Q15036 470 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 COBLL1Q53SF7 1204 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 BTN2A2Q8WVV5 523 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 TADA3O75528 432 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 SKIP12755 728 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 USP11P51784 963 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 KRT17Q04695 432 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 MYBP10242 640 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 HMOX2P30519 316 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 WNT8AQ9H1J5 351 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 EHD2Q9NZN4 543 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 MAD2L2Q9UI95 211 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 A0A087WUV0 522 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-205ENST00000418258 CTIFO43310 598 aaKnown RBP11.85□□□□□ -0.51
PTCH1-205ENST00000418258 KCNQ2O43526 872 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 GH1P01241 217 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 MMEP08473 750 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 WARS2Q9UGM6 360 aaKnown RBP11.85□□□□□ -0.51
PTCH1-205ENST00000418258 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
PTCH1-205ENST00000418258 MFAP3LO75121 409 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 CPT1AP50416 773 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 LRRC74AQ0VAA2 488 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ARMC6Q6NXE6 501 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ELAC2Q9BQ52 826 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 PRR23AA6NEV1 266 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 CYP27B1O15528 508 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 CELF2O95319 508 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 RALBP11234 206 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 CYP19A1P11511 503 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF211Q13398 564 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 WDR72Q3MJ13 1102 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 RHOT1Q8IXI2 618 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 INTS2Q9H0H0 1204 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 AGAP1Q9UPQ3 857 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 DDHD2O94830 711 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ITGA4P13612 1032 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ATPAF2Q8N5M1 289 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 SYTL2Q9HCH5 934 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 TRAF3IP3Q9Y228 551 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 TYK2P29597 1187 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 RAP1GDS1P52306 607 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 PDIA2Q13087 525 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ZBTB17Q13105 803 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 LMBRD2Q68DH5 695 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 GLB1LQ6UWU2 654 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 TEX13BQ9BXU2 312 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 STXBP3O00186 592 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 HIST1H2AGP0C0S8 130 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 HIST1H2ADP20671 130 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms