RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ENGASEQ8NFI3 743 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 HAPLN2Q9GZV7 340 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 UBN1Q9NPG3 1134 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 EXOC1Q9NV70 894 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 GIT1Q9Y2X7 761 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 CITO14578 2027 aa13.66□□□□□ -0.22
SKA1-203ENST00000417656 PVALEFA0A1B0GWK0 134 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 ANKRD63C9JTQ0 380 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 INPPL1O15357 1258 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 CLDN3O15551 220 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
SKA1-203ENST00000417656 LPXNO60711 386 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 ZC3H11AO75152 810 aaKnown RBP eCLIP13.65□□□□□ -0.22
SKA1-203ENST00000417656 NR1I2O75469 434 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 MYL1P05976 194 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 FOSL2P15408 326 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 BMPR1AP36894 532 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 RNASELQ05823 741 aaKnown RBP13.65□□□□□ -0.22
SKA1-203ENST00000417656 MCL1Q07820 350 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 ACCSQ96QU6 501 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
SKA1-203ENST00000417656 C11orf84Q9BUA3 381 aaPredicted RBP13.65□□□□□ -0.22
SKA1-203ENST00000417656 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.22
SKA1-203ENST00000417656 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 PLAGL2Q9UPG8 496 aa13.65□□□□□ -0.22
SKA1-203ENST00000417656 TRIP11Q15643 1979 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 CSPG5O95196 566 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
SKA1-203ENST00000417656 DPYDQ12882 1025 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 GRIK3Q13003 919 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 GPM6BQ13491 265 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 PNOCQ13519 176 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 POSTNQ15063 836 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 STXBP4Q6ZWJ1 553 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 EPM2AIP1Q7L775 607 aaPredicted RBP13.64□□□□□ -0.23
SKA1-203ENST00000417656 ZNF280BQ86YH2 543 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 GSTCDQ8NEC7 633 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 ZNF558Q96NG5 402 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 NRDE2Q9H7Z3 1164 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 SLC39A2Q9NP94 309 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 AAASQ9NRG9 546 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 MIOSQ9NXC5 875 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 DNAJB4Q9UDY4 337 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 UBE4BO95155 1302 aa13.64□□□□□ -0.23
SKA1-203ENST00000417656 A0A0B4J269 797 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 H3BNC9 293 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 PTGESO14684 152 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
SKA1-203ENST00000417656 MEFVO15553 781 aaPredicted RBP13.63□□□□□ -0.23
SKA1-203ENST00000417656 KINO60870 393 aaKnown RBP13.63□□□□□ -0.23
SKA1-203ENST00000417656 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
SKA1-203ENST00000417656 DDHD2O94830 711 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 ITGB1P05556 798 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 RB1P06400 928 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 CXCL8P10145 99 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 IGFBP4P22692 258 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 TNFSF9P41273 254 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 SLC11A1P49279 550 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
SKA1-203ENST00000417656 BCAR1P56945 870 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 UBE2HP62256 183 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 KCNT2Q6UVM3 1135 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 CLEC17AQ6ZS10 378 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
SKA1-203ENST00000417656 NELFCDQ8IXH7 590 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 SCFD1Q8WVM8 642 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 SNX27Q96L92 541 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 FAM193BQ96PV7 902 aaPredicted RBP13.63□□□□□ -0.23
SKA1-203ENST00000417656 KANSL3Q9P2N6 904 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 PCDHB12Q9Y5F1 795 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 MYO9BQ13459 2157 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 ANK1P16157 1881 aa13.63□□□□□ -0.23
SKA1-203ENST00000417656 TRANK1O15050 2925 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 NT5C1B-RDH14C9J2C7 533 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 OGTO15294 1046 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 GRM6O15303 877 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 FAM189A1O60320 539 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 FGF18O76093 207 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 HOXD13P35453 343 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 PPM1AP35813 382 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 DSC1Q08554 894 aa13.62□□□□□ -0.23
SKA1-203ENST00000417656 STK4Q13043 487 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms