RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SMG5Q9UPR3 1016 aaKnown RBP19.95■□□□□ 0.78
VCP-202ENST00000417448 FAN1Q9Y2M0 1017 aa19.95■□□□□ 0.78
VCP-202ENST00000417448 PCDHB2Q9Y5E7 798 aa19.95■□□□□ 0.78
VCP-202ENST00000417448 PCDHGA2Q9Y5H1 932 aa19.95■□□□□ 0.78
VCP-202ENST00000417448 TDRD15B5MCY1 1934 aaKnown RBP19.94■□□□□ 0.78
VCP-202ENST00000417448 KANSL1LA0AUZ9 987 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 POMCP01189 267 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 RAB27AP51159 221 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 LMNB2Q03252 620 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 CSTF1Q05048 431 aaKnown RBP19.94■□□□□ 0.78
VCP-202ENST00000417448 PKP1Q13835 747 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 SLFN12Q8IYM2 578 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 URGCPQ8TCY9 931 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 DYDC2Q96IM9 177 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 NT5C3AQ9H0P0 336 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 RXFP1Q9HBX9 757 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 PARD6AQ9NPB6 346 aa19.94■□□□□ 0.78
VCP-202ENST00000417448 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.94■□□□□ 0.78
VCP-202ENST00000417448 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.94■□□□□ 0.78
VCP-202ENST00000417448 WRAP73Q9P2S5 460 aaPredicted RBP19.94■□□□□ 0.78
VCP-202ENST00000417448 PRG3Q9Y2Y8 225 aaPredicted RBP19.94■□□□□ 0.78
VCP-202ENST00000417448 IGKV6-21A0A0C4DH24 114 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 PRR5-ARHGAP8B1AHC4 643 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 F8W810 466 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 ZBTB39O15060 712 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 LAMTOR5O43504 91 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 ALDH2P05091 517 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 OR52Z1P0C646 297 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 SFNP31947 248 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 TRAPPC10P48553 1259 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 ARHGAP8P85298 464 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 CYP4A11Q02928 519 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 CTTNQ14247 550 aaKnown RBP19.93■□□□□ 0.78
VCP-202ENST00000417448 IL17AQ16552 155 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 FOXD4L6Q3SYB3 417 aaPredicted RBP19.93■□□□□ 0.78
VCP-202ENST00000417448 PARM1Q6UWI2 310 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 FOXD4L3Q6VB84 417 aaPredicted RBP19.93■□□□□ 0.78
VCP-202ENST00000417448 KSR1Q8IVT5 923 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 NELL1Q92832 810 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 RTKNQ9BST9 563 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 BCO2Q9BYV7 579 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 EPC1Q9H2F5 836 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 RSAD1Q9HA92 442 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 PIDD1Q9HB75 910 aa19.93■□□□□ 0.78
VCP-202ENST00000417448 LILRB5O75023 590 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 GLUD2P49448 558 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 CATSPER4Q7RTX7 472 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 PALB2Q86YC2 1186 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 ATRIPQ8WXE1 791 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 PGBD4Q96DM1 585 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 SHDQ96IW2 340 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 B3GALT6Q96L58 329 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 DPP7Q9UHL4 492 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 RALYQ9UKM9 306 aaKnown RBP19.92■□□□□ 0.78
VCP-202ENST00000417448 USP18Q9UMW8 372 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 ARID2Q68CP9 1835 aa19.92■□□□□ 0.78
VCP-202ENST00000417448 DDX11L8A8MPP1 907 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 TGM5O43548 720 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 STBD1O95210 358 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 CEBPZQ03701 1054 aaKnown RBP19.91■□□□□ 0.78
VCP-202ENST00000417448 UBXN2BQ14CS0 331 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 EPHA7Q15375 998 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 MTERF2Q49AM1 385 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 RILPL1Q5EBL4 403 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 ELMSAN1Q6PJG2 1045 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 TSSK4Q6SA08 328 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 MRPL10Q7Z7H8 261 aaKnown RBP19.91■□□□□ 0.78
VCP-202ENST00000417448 ZNF410Q86VK4 478 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 RHPN2Q8IUC4 686 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 COLGALT2Q8IYK4 626 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 HDAC7Q8WUI4 952 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 BORCS6Q96GS4 357 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 FAM193BQ96PV7 902 aaPredicted RBP19.91■□□□□ 0.78
VCP-202ENST00000417448 EIF2AK1Q9BQI3 630 aaKnown RBP19.91■□□□□ 0.78
VCP-202ENST00000417448 PRKD2Q9BZL6 878 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 AGPAT5Q9NUQ2 364 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 ZSCAN32Q9NX65 697 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 SSX2IPQ9Y2D8 614 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 CLIC4Q9Y696 253 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 ATRXP46100 2492 aa19.91■□□□□ 0.78
VCP-202ENST00000417448 TCHHQ07283 1943 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 CD72P21854 359 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 CDC42EP1Q00587 391 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 DSG1Q02413 1049 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 MLF2Q15773 248 aaPredicted RBP19.9■□□□□ 0.78
VCP-202ENST00000417448 UBXN11Q5T124 520 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 PLA2G4FQ68DD2 849 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 BRAPQ7Z569 592 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 TPH2Q8IWU9 490 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 ZNF579Q8NAF0 562 aaKnown RBP19.9■□□□□ 0.78
VCP-202ENST00000417448 RDM1Q8NG50 284 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 NLRP4Q96MN2 994 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 NIFKQ9BYG3 293 aaKnown RBP19.9■□□□□ 0.78
VCP-202ENST00000417448 PLEKHA4Q9H4M7 779 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 IFT122Q9HBG6 1241 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 CHST7Q9NS84 486 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 ZDHHC7Q9NXF8 308 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 SEPT9Q9UHD8 586 aaPredicted RBP19.9■□□□□ 0.78
VCP-202ENST00000417448 FRYQ5TBA9 3013 aa19.9■□□□□ 0.78
VCP-202ENST00000417448 NOTCH4Q99466 2003 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms