RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LIG1P18858 919 aa27.91■■■□□ 2.06
VEGFA-208ENST00000417285 CREMQ03060 361 aa27.91■■■□□ 2.06
VEGFA-208ENST00000417285 DCAF4L1Q3SXM0 396 aa27.91■■■□□ 2.06
VEGFA-208ENST00000417285 KCTD17Q8N5Z5 321 aa27.91■■■□□ 2.06
VEGFA-208ENST00000417285 TDRD5Q8NAT2 981 aaKnown RBP27.91■■■□□ 2.06
VEGFA-208ENST00000417285 SNTG2Q9NY99 539 aa27.91■■■□□ 2.06
VEGFA-208ENST00000417285 GLUD1P00367 558 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 THP07101 528 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 HSP90AA2PQ14568 343 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-208ENST00000417285 FUT10Q6P4F1 479 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 SUGP1Q8IWZ8 645 aaKnown RBP27.9■■■□□ 2.06
VEGFA-208ENST00000417285 KREMEN2Q8NCW0 462 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 ACSF2Q96CM8 615 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-208ENST00000417285 RHOBTB2Q9BYZ6 727 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 GPR62Q9BZJ7 368 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 FNIP2Q9P278 1114 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 SORCS3Q9UPU3 1222 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 PHLPP2Q6ZVD8 1323 aa27.9■■■□□ 2.06
VEGFA-208ENST00000417285 F8W810 466 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 MTMR3Q13615 1198 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 IL17AQ16552 155 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 OTOP3Q7RTS5 596 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 FBXL6Q8N531 539 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 PLEKHA4Q9H4M7 779 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 POLD4Q9HCU8 107 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 KCNG1Q9UIX4 513 aa27.89■■■□□ 2.06
VEGFA-208ENST00000417285 RBM19Q9Y4C8 960 aaKnown RBP27.89■■■□□ 2.06
VEGFA-208ENST00000417285 HOXD11P31277 338 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-208ENST00000417285 NT5DC1Q5TFE4 455 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 ATF7IP2Q5U623 682 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 ASIC4Q96FT7 647 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 DRC1Q96MC2 740 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 PRRX2Q99811 253 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 TIPINQ9BVW5 301 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 C17orf75Q9HAS0 396 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 MAN1C1Q9NR34 630 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 LIMD1Q9UGP4 676 aa27.88■■■□□ 2.05
VEGFA-208ENST00000417285 SF3B1O75533 1304 aaKnown RBP eCLIP27.88■■■□□ 2.056e-7■■■■■ 31.1
VEGFA-208ENST00000417285 ZDBF2Q9HCK1 2354 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 CCDC169A6NNP5 214 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 E9PMD0 336 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 RECQL4O94761 1208 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 ATP2C1P98194 919 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-208ENST00000417285 CCDC149Q6ZUS6 474 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 RIN2Q8WYP3 895 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-208ENST00000417285 KIFC3Q9BVG8 833 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 TMEM134Q9H6X4 195 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 TNFSF13BQ9Y275 285 aa27.87■■■□□ 2.05
VEGFA-208ENST00000417285 PTGESO14684 152 aa27.86■■■□□ 2.05
VEGFA-208ENST00000417285 NPTX2P47972 431 aa27.86■■■□□ 2.05
VEGFA-208ENST00000417285 ELAVL2Q12926 359 aaKnown RBP27.86■■■□□ 2.05
VEGFA-208ENST00000417285 EEF1DP3Q658K8 133 aa27.86■■■□□ 2.05
VEGFA-208ENST00000417285 LARP1BQ659C4 914 aaKnown RBP27.86■■■□□ 2.05
VEGFA-208ENST00000417285 MMTAG2Q9BU76 263 aaKnown RBP27.86■■■□□ 2.05
VEGFA-208ENST00000417285 USP20Q9Y2K6 914 aa27.86■■■□□ 2.05
VEGFA-208ENST00000417285 ZNF318Q5VUA4 2279 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 CCDC195A0A1B0GUA6 201 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 PP2D1A8MPX8 630 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 CDC25AP30304 524 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 PEX3P56589 373 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 DMP1Q13316 513 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-208ENST00000417285 ARL6IP4Q66PJ3 421 aaKnown RBP27.85■■■□□ 2.05
VEGFA-208ENST00000417285 RINT1Q6NUQ1 792 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 C1orf186Q6ZWK4 172 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 RABGGTAQ92696 567 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 NT5C3AQ9H0P0 336 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 GDAQ9Y2T3 454 aa27.85■■■□□ 2.05
VEGFA-208ENST00000417285 WDFY4Q6ZS81 3184 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 HIP1RO75146 1068 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 EDN1P05305 212 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 HYIQ5T013 277 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 PDXDC1Q6P996 788 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 LILRA6Q6PI73 481 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 PALB2Q86YC2 1186 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 B3GALT6Q96L58 329 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 NTPCRQ9BSD7 190 aaKnown RBP27.84■■■□□ 2.05
VEGFA-208ENST00000417285 TTPALQ9BTX7 342 aa27.84■■■□□ 2.05
VEGFA-208ENST00000417285 CASTOR2A6NHX0 329 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 PAPLNO95428 1278 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 GUCY2CP25092 1073 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 NAB2Q15742 525 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 STAMQ92783 540 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 ACO2Q99798 780 aaKnown RBP27.83■■■□□ 2.05
VEGFA-208ENST00000417285 PAAF1Q9BRP4 392 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 MRPL4Q9BYD3 311 aaKnown RBP27.83■■■□□ 2.05
VEGFA-208ENST00000417285 KMT5AQ9NQR1 393 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 ZDHHC7Q9NXF8 308 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 ARHGAP28Q9P2N2 729 aa27.83■■■□□ 2.05
VEGFA-208ENST00000417285 TDRD15B5MCY1 1934 aaKnown RBP27.82■■■□□ 2.04
VEGFA-208ENST00000417285 TGM5O43548 720 aa27.82■■■□□ 2.04
VEGFA-208ENST00000417285 BRD1O95696 1058 aa27.82■■■□□ 2.04
VEGFA-208ENST00000417285 FAM171A1Q5VUB5 890 aa27.82■■■□□ 2.04
VEGFA-208ENST00000417285 DAW1Q8N136 415 aa27.82■■■□□ 2.04
VEGFA-208ENST00000417285 RUSC1Q9BVN2 902 aa27.82■■■□□ 2.04
VEGFA-208ENST00000417285 WDR6Q9NNW5 1121 aaKnown RBP27.82■■■□□ 2.04
VEGFA-208ENST00000417285 TOPORSQ9NS56 1045 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-208ENST00000417285 KCND2Q9NZV8 630 aa27.82■■■□□ 2.04
VEGFA-208ENST00000417285 SLC26A4O43511 780 aa27.81■■■□□ 2.04
VEGFA-208ENST00000417285 KIF4AO95239 1232 aa27.81■■■□□ 2.04
VEGFA-208ENST00000417285 SPATA31D3P0C874 917 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms