RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 POLD4Q9HCU8 107 aa24.07■■□□□ 1.44
ACTB-203ENST00000417101 SNTG2Q9NY99 539 aa24.07■■□□□ 1.44
ACTB-203ENST00000417101 DENND4AQ7Z401 1863 aa24.07■■□□□ 1.44
ACTB-203ENST00000417101 ACKR2O00590 384 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 MUTP22033 750 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 FXR2P51116 673 aaKnown RBP eCLIP24.06■■□□□ 1.44
ACTB-203ENST00000417101 TUSC3Q13454 348 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 HSP90AA2PQ14568 343 aaPredicted RBP24.06■■□□□ 1.44
ACTB-203ENST00000417101 PPP2R5AQ15172 486 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 GLYCTKQ8IVS8 523 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 KIFC3Q9BVG8 833 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 CCDC113Q9H0I3 377 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.06■■□□□ 1.44
ACTB-203ENST00000417101 LRWD1Q9UFC0 647 aa24.06■■□□□ 1.44
ACTB-203ENST00000417101 CASTOR2A6NHX0 329 aa24.05■■□□□ 1.44
ACTB-203ENST00000417101 RECQL4O94761 1208 aa24.05■■□□□ 1.44
ACTB-203ENST00000417101 EDN1P05305 212 aa24.05■■□□□ 1.44
ACTB-203ENST00000417101 RPL17P18621 184 aaKnown RBP24.05■■□□□ 1.44
ACTB-203ENST00000417101 ADPGKQ9BRR6 497 aa24.05■■□□□ 1.44
ACTB-203ENST00000417101 BHMT2Q9H2M3 363 aa24.05■■□□□ 1.44
ACTB-203ENST00000417101 KIAA1024Q9UPX6 916 aa24.05■■□□□ 1.44
ACTB-203ENST00000417101 C2orf16Q68DN1 1984 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 PTGESO14684 152 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 TGM5O43548 720 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 EEF1DP3Q658K8 133 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 CYP26C1Q6V0L0 522 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 GPR65Q8IYL9 337 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 HASPINQ8TF76 798 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 HDAC7Q8WUI4 952 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 SMG7Q92540 1137 aaKnown RBP24.04■■□□□ 1.44
ACTB-203ENST00000417101 IFT74Q96LB3 600 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 CXCL16Q9H2A7 254 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 PLEKHA4Q9H4M7 779 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 WDR6Q9NNW5 1121 aaKnown RBP24.04■■□□□ 1.44
ACTB-203ENST00000417101 FNIP2Q9P278 1114 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 PLXNA3P51805 1871 aa24.04■■□□□ 1.44
ACTB-203ENST00000417101 SF3B1O75533 1304 aaKnown RBP eCLIP24.04■■□□□ 1.446e-7■■□□□ 12
ACTB-203ENST00000417101 N4BP1O75113 896 aaKnown RBP24.03■■□□□ 1.44
ACTB-203ENST00000417101 THP07101 528 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 U2AF2P26368 475 aaKnown RBP eCLIP24.03■■□□□ 1.443e-17■□□□□ 9.4
ACTB-203ENST00000417101 TDGQ13569 410 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 PRSS55Q6UWB4 352 aaPredicted RBP24.03■■□□□ 1.44
ACTB-203ENST00000417101 SNX29Q8TEQ0 813 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 KIFAP3Q92845 792 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 ZNF707Q96C28 371 aaPredicted RBP24.03■■□□□ 1.44
ACTB-203ENST00000417101 RHOBTB2Q9BYZ6 727 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 MFSD1Q9H3U5 465 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 KCNK12Q9HB15 430 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 DDX19AQ9NUU7 478 aaKnown RBP24.03■■□□□ 1.44
ACTB-203ENST00000417101 GDAQ9Y2T3 454 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 CLUHO75153 1309 aa24.03■■□□□ 1.44
ACTB-203ENST00000417101 KIF4AO95239 1232 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 C1RP00736 705 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 GBP2P32456 591 aaPredicted RBP24.02■■□□□ 1.44
ACTB-203ENST00000417101 TOB1P50616 345 aaPredicted RBP24.02■■□□□ 1.44
ACTB-203ENST00000417101 EFNA5P52803 228 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 CREMQ03060 361 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 PTGDRQ13258 359 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 PDIA5Q14554 519 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 RTP2Q5QGT7 225 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 LILRA6Q6PI73 481 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 TMEM105Q8N8V8 129 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 FAM86C1Q9NVL1 165 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 PCDHB6Q9Y5E3 794 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 USP34Q70CQ2 3546 aa24.02■■□□□ 1.44
ACTB-203ENST00000417101 NAB2Q15742 525 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 NT5DC1Q5TFE4 455 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 FAM171A1Q5VUB5 890 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 IGSF22Q8N9C0 903 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 STAMQ92783 540 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 TTPALQ9BTX7 342 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 RAB34Q9BZG1 259 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 NT5C3AQ9H0P0 336 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 PIDD1Q9HB75 910 aa24.01■■□□□ 1.43
ACTB-203ENST00000417101 NUBP1P53384 320 aa24■■□□□ 1.43
ACTB-203ENST00000417101 DCAF4L1Q3SXM0 396 aa24■■□□□ 1.43
ACTB-203ENST00000417101 C8orf34Q49A92 452 aa24■■□□□ 1.43
ACTB-203ENST00000417101 ATF7IP2Q5U623 682 aa24■■□□□ 1.43
ACTB-203ENST00000417101 ASTLQ6HA08 431 aaPredicted RBP24■■□□□ 1.43
ACTB-203ENST00000417101 CEP57Q86XR8 500 aa24■■□□□ 1.43
ACTB-203ENST00000417101 ZDHHC7Q9NXF8 308 aa24■■□□□ 1.43
ACTB-203ENST00000417101 IGSF9Q9P2J2 1179 aa24■■□□□ 1.43
ACTB-203ENST00000417101 STK24Q9Y6E0 443 aa24■■□□□ 1.43
ACTB-203ENST00000417101 PP2D1A8MPX8 630 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 H0Y858 1186 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 GALR2O43603 387 aaPredicted RBP23.99■■□□□ 1.43
ACTB-203ENST00000417101 PAPLNO95428 1278 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 PIK3R5Q8WYR1 880 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 ATOH1Q92858 354 aaPredicted RBP23.99■■□□□ 1.43
ACTB-203ENST00000417101 MYADMQ96S97 322 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 PRKD2Q9BZL6 878 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 IRF2BPLQ9H1B7 796 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 DUSP12Q9UNI6 340 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 DNM3Q9UQ16 869 aa23.99■■□□□ 1.43
ACTB-203ENST00000417101 CCDC169A6NNP5 214 aa23.98■■□□□ 1.43
ACTB-203ENST00000417101 E9PMD0 336 aa23.98■■□□□ 1.43
ACTB-203ENST00000417101 K7ERI5 159 aa23.98■■□□□ 1.43
ACTB-203ENST00000417101 PSMD5Q16401 504 aa23.98■■□□□ 1.43
ACTB-203ENST00000417101 GLRA4Q5JXX5 417 aa23.98■■□□□ 1.43
ACTB-203ENST00000417101 FLCNQ8NFG4 579 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms