RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TATDN2Q93075 761 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 SCLT1Q96NL6 688 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 ACO2Q99798 780 aaKnown RBP11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 FDXACB1Q9BRP7 624 aaPredicted RBP11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 TSGA10Q9BZW7 698 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 ACP6Q9NPH0 428 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 RAB20Q9NX57 234 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 MYO1AQ9UBC5 1043 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 GINS2Q9Y248 185 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 MRFAP1Q9Y605 127 aa11.55□□□□□ -0.56
SMPD4P1-201ENST00000416717 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 ZNF865P0CJ78 1059 aaPredicted RBP11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 RGS2P41220 211 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 PRKCIP41743 596 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 BEX3Q00994 111 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 TMEM62Q0P6H9 643 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 PRPF4BQ13523 1007 aaKnown RBP11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 PSMD6Q15008 389 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 GRIK4Q16099 956 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 MTHFD1LQ6UB35 978 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 GLYCTKQ8IVS8 523 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 THNSL1Q8IYQ7 743 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 KREMEN1Q96MU8 473 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 KIAA1586Q9HCI6 787 aa11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 BZW2Q9Y6E2 419 aaKnown RBP11.54□□□□□ -0.56
SMPD4P1-201ENST00000416717 DDX3XO00571 662 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 KIF3CO14782 793 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 SRGAP2O75044 1071 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 TOM1L1O75674 476 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 LDHAP00338 332 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 EEF1DP3Q658K8 133 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 SCARA3Q6AZY7 606 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ALKBH5Q6P6C2 394 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ZPBP2Q6X784 338 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ZNF662Q6ZS27 426 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 CEP120Q8N960 986 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 LNX1Q8TBB1 728 aaPredicted RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 NT5C1BQ96P26 610 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 FAM49AQ9H0Q0 323 aaPredicted RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 C2orf40Q9H1Z8 148 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 IFT122Q9HBG6 1241 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 PUF60Q9UHX1 559 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 NAGPAQ9UK23 515 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 GJD2Q9UKL4 321 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ANK1P16157 1881 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 PIK3CAP42336 1068 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 PTENP60484 403 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 NCBP1Q09161 790 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ELF2Q15723 593 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ERCC6LQ2NKX8 1250 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 MARCH8Q5T0T0 291 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ATF7IP2Q5U623 682 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 SPOPLQ6IQ16 392 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 OR5B17Q8NGF7 314 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 USP6NLQ92738 828 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 CPB2Q96IY4 423 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 GNEQ9Y223 722 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 TRIP11Q15643 1979 aa11.53□□□□□ -0.56
SMPD4P1-201ENST00000416717 BRCA2P51587 3418 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 ACKR2O00590 384 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 MAGEB2O15479 319 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 ASAP2O43150 1006 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 AOC2O75106 756 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 TACC1O75410 805 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 CALCAP01258 141 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 HLA-DRAP01903 254 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 MYL3P08590 195 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 HOXC6P09630 235 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 SCP2P22307 547 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 FGFR4P22455 802 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 TMOD1P28289 359 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 PHKA2P46019 1235 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 TAF3Q5VWG9 929 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 SMC1BQ8NDV3 1235 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 HELQQ8TDG4 1101 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 PSMB7Q99436 277 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 APBA2Q99767 749 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 ARID3AQ99856 593 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 LUC7LQ9NQ29 371 aaKnown RBP11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 COQ4Q9Y3A0 265 aa11.52□□□□□ -0.56
SMPD4P1-201ENST00000416717 KIAA0391O15091 583 aaKnown RBP11.52□□□□□ -0.57
SMPD4P1-201ENST00000416717 PJA2O43164 708 aa11.52□□□□□ -0.57
SMPD4P1-201ENST00000416717 CYP26A1O43174 497 aa11.52□□□□□ -0.57
SMPD4P1-201ENST00000416717 PHACTR2O75167 634 aa11.52□□□□□ -0.57
SMPD4P1-201ENST00000416717 SGPL1O95470 568 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms