RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PEX3P56589 373 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 ZXDAP98168 799 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 DSG1Q02413 1049 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 GRIN1Q05586 938 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 ITIH3Q06033 890 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 HYIQ5T013 277 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 C1orf186Q6ZWK4 172 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 HACE1Q8IYU2 909 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 KIFAP3Q92845 792 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 PLIN2Q99541 437 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
UBXN4-203ENST00000416538 CHST7Q9NS84 486 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 ARHGAP28Q9P2N2 729 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 KIF3AQ9Y496 699 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
UBXN4-203ENST00000416538 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 MEFVO15553 781 aaPredicted RBP16.64■□□□□ 0.25
UBXN4-203ENST00000416538 KLRC2P26717 231 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 BMS1Q14692 1282 aaKnown RBP16.64■□□□□ 0.25
UBXN4-203ENST00000416538 PTPN21Q16825 1174 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 GLRA4Q5JXX5 417 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 RTP2Q5QGT7 225 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 KRT79Q5XKE5 535 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 CES5AQ6NT32 575 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 DTHD1Q6ZMT9 781 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 TRIM67Q6ZTA4 783 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 CABP7Q86V35 215 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 ASIC4Q96FT7 647 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 EMILIN2Q9BXX0 1053 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 CDT1Q9H211 546 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 SFXN1Q9H9B4 322 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 RXFP1Q9HBX9 757 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 MAN1C1Q9NR34 630 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 ADAM28Q9UKQ2 775 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 SMC3Q9UQE7 1217 aa16.64■□□□□ 0.25
UBXN4-203ENST00000416538 WDFY4Q6ZS81 3184 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 H3BQV1 296 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 RPL17P18621 184 aaKnown RBP16.63■□□□□ 0.25
UBXN4-203ENST00000416538 MTHFRP42898 656 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 TUSC3Q13454 348 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 HSP90AA2PQ14568 343 aaPredicted RBP16.63■□□□□ 0.25
UBXN4-203ENST00000416538 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM132AQ24JP5 1023 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 ATF7IP2Q5U623 682 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
UBXN4-203ENST00000416538 GPR149Q86SP6 731 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 NECTIN4Q96NY8 510 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
UBXN4-203ENST00000416538 PTPRHQ9HD43 1115 aa16.63■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM221A6NGB7 291 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 M0R296 226 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 RFPL2O75678 378 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 ASGR2P07307 311 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 EFNA5P52803 228 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 CUL4AQ13619 759 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 DCAF4L1Q3SXM0 396 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 CD300LGQ6UXG3 332 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 GLYCTKQ8IVS8 523 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM87AQ8NBN3 555 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 RIPOR3Q96MK2 946 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 PPP1R10Q96QC0 940 aaKnown RBP16.62■□□□□ 0.25
UBXN4-203ENST00000416538 ACO2Q99798 780 aaKnown RBP16.62■□□□□ 0.25
UBXN4-203ENST00000416538 COLEC11Q9BWP8 271 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 GOLGA2P5Q9HBQ8 144 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 STK39Q9UEW8 545 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 DNM3Q9UQ16 869 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 TNFSF13BQ9Y275 285 aa16.62■□□□□ 0.25
UBXN4-203ENST00000416538 TSC2P49815 1807 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 CCDC169A6NNP5 214 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 SLC16A4O15374 487 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 N4BP1O75113 896 aaKnown RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 BRD1O95696 1058 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 GLUD1P00367 558 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 PDGFBP01127 241 aaPredicted RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 ADH1AP07327 375 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 SPATA31D3P0C874 917 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 PROZP22891 400 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 GUCY2CP25092 1073 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 MCM2P49736 904 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 SOX4Q06945 474 aaPredicted RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 DMP1Q13316 513 aaPredicted RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 SPATA31D4Q6ZUB0 917 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 C3orf58Q8NDZ4 430 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 ZNF707Q96C28 371 aaPredicted RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 ADPGKQ9BRR6 497 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 TARS2Q9BW92 718 aaKnown RBP16.61■□□□□ 0.25
UBXN4-203ENST00000416538 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms