RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZBTB33Q86T24 672 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 ZNF280BQ86YH2 543 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 MAP4K3Q8IVH8 894 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 MRPS27Q92552 414 aaKnown RBP19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 TMEM169Q96HH4 297 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 TOPORSQ9NS56 1045 aaPredicted RBP19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 DNAJB4Q9UDY4 337 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 COG5Q9UP83 839 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 GDAQ9Y2T3 454 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 A0A1B0GVL5 298 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 NR1I2O75469 434 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 DDHD2O94830 711 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 ALDH2P05091 517 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 GALTP07902 379 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 SLFN14P0C7P3 912 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 DNAJB1P25685 340 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 MATR3P43243 847 aaKnown RBP eCLIP19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 ASIC1P78348 528 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 MCL1Q07820 350 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 DSC1Q08554 894 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 PDE12Q6L8Q7 609 aaKnown RBP19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 GSTCDQ8NEC7 633 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 PPP2R3CQ969Q6 453 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 C7orf25Q9BPX7 421 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 GDPD2Q9HCC8 539 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 TLR9Q9NR96 1032 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 HPSEQ9Y251 543 aa19.71■□□□□ 0.75
SEMA3B-201ENST00000416295 SPTBN5Q9NRC6 3674 aaKnown RBP19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 FAM237AA0A1B0GTK4 181 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 NT5C1B-RDH14C9J2C7 533 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 B4GALT3O60512 393 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 GCNT3O95395 438 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 HARSP12081 509 aaKnown RBP19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 SLC11A1P49279 550 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 CAMK1Q14012 370 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 ZC2HC1CQ53FD0 456 aaPredicted RBP19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 COLGALT2Q8IYK4 626 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 IGSF21Q96ID5 467 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 ZBTB45Q96K62 511 aaPredicted RBP19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 ACAP3Q96P50 834 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 MIOSQ9NXC5 875 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 STK39Q9UEW8 545 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 EXOC7Q9UPT5 735 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 FAN1Q9Y2M0 1017 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 PCDHB13Q9Y5F0 798 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 NCOR1O75376 2440 aa19.7■□□□□ 0.74
SEMA3B-201ENST00000416295 TNFRSF10AO00220 468 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 ACTN4O43707 911 aaKnown RBP19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 PPP1R37O75864 691 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 CSPG5O95196 566 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 THP07101 528 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 SYKP43405 635 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 COASYQ13057 564 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 BMS1Q14692 1282 aaKnown RBP19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 KYAT1Q16773 422 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 STXBP4Q6ZWJ1 553 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 CEP120Q8N960 986 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 FSIP1Q8NA03 581 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 MICAL1Q8TDZ2 1067 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 ADAMTS19Q8TE59 1207 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 TBC1D7Q9P0N9 293 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 SERTAD1Q9UHV2 236 aa19.69■□□□□ 0.74
SEMA3B-201ENST00000416295 GOLGA6L4A6NEF3 574 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 PTGESO14684 152 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 NRP1O14786 923 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 AFMP43652 599 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 OR1G1P47890 313 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 NDUFA8P51970 172 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 OSTNP61366 133 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 TCEAL5Q5H9L2 206 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 L1TD1Q5T7N2 865 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 SLFN12LQ6IEE8 588 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 DDX53Q86TM3 631 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 TMEM173Q86WV6 379 aaPredicted RBP19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 ACCSQ96QU6 501 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 STRA6Q9BX79 667 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 NGRNQ9NPE2 291 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 ENTPD7Q9NQZ7 604 aa19.68■□□□□ 0.74
SEMA3B-201ENST00000416295 NCK2O43639 380 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 MYL1P05976 194 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 CLTAP09496 248 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 IRS1P35568 1242 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 TUSC3Q13454 348 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 UNC13DQ70J99 1090 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 HLA-CQ95604 372 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 SNX27Q96L92 541 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 UHRF1Q96T88 793 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 TCF25Q9BQ70 676 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 COLEC11Q9BWP8 271 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 CHMP5Q9NZZ3 219 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 PRG3Q9Y2Y8 225 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 PLXNA4Q9HCM2 1894 aa19.67■□□□□ 0.74
SEMA3B-201ENST00000416295 A0A0B4J269 797 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 PVALEFA0A1B0GWK0 134 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 FSCN2O14926 492 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 OGTO15294 1046 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 MYBP10242 640 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 ERVFC1P60507 584 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 TPRNQ4KMQ1 711 aa19.66■□□□□ 0.74
SEMA3B-201ENST00000416295 XKR4Q5GH76 650 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms