RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TJP2Q9UDY2 1190 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 TELO2Q9Y4R8 837 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 SCN10AQ9Y5Y9 1956 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 LAMA2P24043 3122 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 GBF1Q92538 1859 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 TANC1Q9C0D5 1861 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 KAT6AQ92794 2004 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 FRMPD4Q14CM0 1322 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 RANBP2P49792 3224 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 LOXHD1Q8IVV2 1947 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 CCDC196A0A1B0GTZ2 297 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 SPDYE3A6NKU9 549 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 B4DLN1 442 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 PRPF3O43395 683 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 MARCH6O60337 910 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 PFKFB2O60825 505 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 EIF3JO75822 258 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 ZNF286BP0CG31 522 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 VSIG8P0DPA2 414 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 IFNAR1P17181 557 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 MRPL12P52815 198 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 RCAN1P53805 252 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 EVCP57679 992 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 SP2Q02086 613 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 SP4Q02446 784 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 ARHGAP1Q07960 439 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 TTLL4Q14679 1199 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 ME3Q16798 604 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 PFKFB3Q16875 520 aaPredicted RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 LONRF2Q1L5Z9 754 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 FOXD4L6Q3SYB3 417 aaPredicted RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 EXOSC6Q5RKV6 272 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 CCDC62Q6P9F0 684 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 FOXD4L3Q6VB84 417 aaPredicted RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 VSIG10LQ86VR7 867 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 HID1Q8IV36 788 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 SLFN12Q8IYM2 578 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 RPUSD2Q8IZ73 545 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 FBXL16Q8N461 479 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 ZNF507Q8TCN5 953 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 AFG1LQ8WV93 481 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 ZNF274Q96GC6 653 aaPredicted RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 IWS1Q96ST2 819 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 KIF2CQ99661 725 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 RNF26Q9BY78 433 aaPredicted RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 ANO3Q9BYT9 981 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 EPN3Q9H201 632 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 METTL14Q9HCE5 456 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 RIC8AQ9NPQ8 531 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 DISC1Q9NRI5 854 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 BARHL2Q9NY43 387 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 PCDHA6Q9UN73 950 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 KCNJ14Q9UNX9 436 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 PCDHA8Q9Y5H6 950 aa5.55□□□□□ -1.52
VPS41-205ENST00000414632 MYH9P35579 1960 aaKnown RBP5.55□□□□□ -1.52
VPS41-205ENST00000414632 SIP14410 1827 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 OIP5O43482 229 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 JAK2O60674 1132 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 DEXIO95424 95 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 CTDNEP1O95476 244 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 GGPS1O95749 300 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 GH1P01241 217 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 TP53P04637 393 aaPredicted RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 MMP3P08254 477 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 NID1P14543 1247 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 UBA1P22314 1058 aaKnown RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 CST5P28325 142 aaPredicted RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 CCNFP41002 786 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 CPT1AP50416 773 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 PMS1P54277 932 aaKnown RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 TLE2Q04725 743 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 ST3GAL1Q11201 340 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 DUOXA2Q1HG44 320 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 BBS9Q3SYG4 887 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 SV2CQ496J9 727 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 FAM47CQ5HY64 1035 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 SLC6A19Q695T7 634 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 CCDC83Q8IWF9 413 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 MRPL41Q8IXM3 137 aaKnown RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 PHACTR4Q8IZ21 702 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 PCSK9Q8NBP7 692 aaKnown RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 CYP2W1Q8TAV3 490 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 UBASH3BQ8TF42 649 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 GTF3C6Q969F1 213 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 GLT1D1Q96MS3 346 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 ALG1Q9BT22 464 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 ALDH8A1Q9H2A2 487 aaPredicted RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 FAM86C1Q9NVL1 165 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 MAP3K20Q9NYL2 800 aaKnown RBP5.54□□□□□ -1.52
VPS41-205ENST00000414632 CRIM1Q9NZV1 1036 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 NR2E3Q9Y5X4 410 aa5.54□□□□□ -1.52
VPS41-205ENST00000414632 GRIN2DO15399 1336 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 PTPRSQ13332 1948 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 A0A0U1RQG5 324 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 TRIM43BA6NCK2 446 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 SHISA8B8ZZ34 492 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 hCG_1984214I3L0E3 225 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms